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Deep phenotyping is the detailed description of patient signs and symptoms using concepts from an ontology. The deep phenotyping of the numerous physician notes in electronic health records requires high throughput methods. Over the past…

Computation and Language · Computer Science 2024-03-12 Syed I. Munzir , Daniel B. Hier , Michael D. Carrithers

Although machine learning has become a powerful tool to augment doctors in clinical analysis, the immense amount of labeled data that is necessary to train supervised learning approaches burdens each development task as time and resource…

Ample evidence suggests that better machine learning models may be steadily obtained by training on increasingly larger datasets on natural language processing (NLP) problems from non-medical domains. Whether the same holds true for medical…

Computation and Language · Computer Science 2020-10-29 Jean-Baptiste Lamare , Tobi Olatunji , Li Yao

Deep learning (DL) has remarkably impacted several different scientific disciplines over the last few years. E.g., in image processing and analysis, DL algorithms were able to outperform other cutting-edge methods. Additionally, DL has…

Image and Video Processing · Electrical Eng. & Systems 2022-05-19 Jan Egger , Christina Gsaxner , Antonio Pepe , Kelsey L. Pomykala , Frederic Jonske , Manuel Kurz , Jianning Li , Jens Kleesiek

Doctors typically write in incomprehensible handwriting, making it difficult for both the general public and some pharmacists to understand the medications they have prescribed. It is not ideal for them to write the prescription quietly and…

Computer Vision and Pattern Recognition · Computer Science 2022-10-24 Pavithiran G , Sharan Padmanabhan , Nuvvuru Divya , Aswathy V , Irene Jerusha P , Chandar B

Alzheimer's Disease (AD) is a severe brain disorder, destroying memories and brain functions. AD causes chronically, progressively, and irreversibly cognitive declination and brain damages. The reliable and effective evaluation of early…

Image and Video Processing · Electrical Eng. & Systems 2021-01-07 Kuo Yang , Emad A. Mohammed

Machine learning-based medical anomaly detection is an important problem that has been extensively studied. Numerous approaches have been proposed across various medical application domains and we observe several similarities across these…

Machine Learning · Computer Science 2021-04-14 Tharindu Fernando , Harshala Gammulle , Simon Denman , Sridha Sridharan , Clinton Fookes

The advancement of natural language processing (NLP) systems in healthcare hinges on language model ability to interpret the intricate information contained within clinical notes. This process often requires integrating information from…

Computation and Language · Computer Science 2024-03-12 Zhichao Yang , Avijit Mitra , Sunjae Kwon , Hong Yu

Natural language processing (NLP) shows promise as a means to automate the labelling of hospital-scale neuroradiology magnetic resonance imaging (MRI) datasets for computer vision applications. To date, however, there has been no thorough…

Natural language processing (NLP) in the medical domain can underperform in real-world applications involving small datasets in a non-English language with few labeled samples and imbalanced classes. There is yet no consensus on how to…

Computation and Language · Computer Science 2024-10-01 Vincent Beliveau , Helene Kaas , Martin Prener , Claes N. Ladefoged , Desmond Elliott , Gitte M. Knudsen , Lars H. Pinborg , Melanie Ganz

Medical coding, the translation of unstructured clinical text into standardized medical codes, is a crucial but time-consuming healthcare practice. Though large language models (LLM) could automate the coding process and improve the…

Computation and Language · Computer Science 2025-03-25 John Wu , David Wu , Jimeng Sun

Feature engineering remains a major bottleneck when creating predictive systems from electronic medical records. At present, an important missing element is detecting predictive regular clinical motifs from irregular episodic records. We…

Machine Learning · Statistics 2016-07-27 Phuoc Nguyen , Truyen Tran , Nilmini Wickramasinghe , Svetha Venkatesh

Automated dementia screening enables early detection and intervention, reducing costs to healthcare systems and increasing quality of life for those affected. Depression has shared symptoms with dementia, adding complexity to diagnoses. The…

Supervised training of deep learning models requires large labeled datasets. There is a growing interest in obtaining such datasets for medical image analysis applications. However, the impact of label noise has not received sufficient…

Computer Vision and Pattern Recognition · Computer Science 2020-03-24 Davood Karimi , Haoran Dou , Simon K. Warfield , Ali Gholipour

People living with dementia (PLwD) often show gradual shifts in how they communicate, becoming less expressive, more repetitive, or drifting off-topic in subtle ways. While caregivers may notice these changes informally, most computational…

Artificial Intelligence · Computer Science 2025-11-21 Joy Lai , Alex Mihailidis

Although deep learning models perform remarkably well across a range of tasks such as language translation and object recognition, it remains unclear what high-level logic, if any, they follow. Understanding this logic may lead to more…

Databases · Computer Science 2019-01-08 Thibault Sellam , Kevin Lin , Ian Yiran Huang , Yiru Chen , Michelle Yang , Carl Vondrick , Eugene Wu

There have been growing concerns around high-stake applications that rely on models trained with biased data, which consequently produce biased predictions, often harming the most vulnerable. In particular, biased medical data could cause…

Computation and Language · Computer Science 2024-09-12 Gavin Butts , Pegah Emdad , Jethro Lee , Shannon Song , Chiman Salavati , Willmar Sosa Diaz , Shiri Dori-Hacohen , Fabricio Murai

Depression has affected millions of people worldwide and has become one of the most common mental disorders. Early mental disorder detection can reduce costs for public health agencies and prevent other major comorbidities. Additionally,…

Computation and Language · Computer Science 2024-04-09 Giuliano Lorenzoni , Cristina Tavares , Nathalia Nascimento , Paulo Alencar , Donald Cowan

Existing research has shown the potential of classifying Alzheimers Disease (AD) from eye-tracking (ET) data with classifiers that rely on task-specific engineered features. In this paper, we investigate whether we can improve on existing…

Computer Vision and Pattern Recognition · Computer Science 2023-09-25 Harshinee Sriram , Cristina Conati , Thalia Field

The extraction and analysis of insights from medical data, primarily stored in free-text formats by healthcare workers, presents significant challenges due to its unstructured nature. Medical coding, a crucial process in healthcare, remains…

Computation and Language · Computer Science 2024-05-28 Mikhail Kulyabin , Gleb Sokolov , Aleksandr Galaida , Andreas Maier , Tomas Arias-Vergara
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