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We propose `Tapestry', a novel approach to pooled testing with application to COVID-19 testing with quantitative Reverse Transcription Polymerase Chain Reaction (RT-PCR) that can result in shorter testing time and conservation of reagents…

With the periodic rise and fall of COVID-19 and numerous countries being affected by its ramifications, there has been a tremendous amount of work that has been done by scientists, researchers, and doctors all over the world. Prompt…

Machine Learning · Computer Science 2021-12-17 Ismail Shahin , Ali Bou Nassif , Mohamed Bader Alsabek

Despite the widespread testing protocols for COVID-19, there are still significant challenges in early detection of the disease, which is crucial for preventing its spread and optimizing patient outcomes. Owing to the limited testing…

Machine Learning · Computer Science 2023-12-13 Moyosolu Akinloye

Early and accurate severity assessment of Coronavirus disease 2019 (COVID-19) based on computed tomography (CT) images offers a great help to the estimation of intensive care unit event and the clinical decision of treatment planning. To…

Image and Video Processing · Electrical Eng. & Systems 2021-09-09 Geng-Xin Xu , Chen Liu , Jun Liu , Zhongxiang Ding , Feng Shi , Man Guo , Wei Zhao , Xiaoming Li , Ying Wei , Yaozong Gao , Chuan-Xian Ren , Dinggang Shen

The outbreak of the COVID-19 (Coronavirus disease 2019) pandemic has changed the world. According to the World Health Organization (WHO), there have been more than 100 million confirmed cases of COVID-19, including more than 2.4 million…

Principal component regression (PCR) is a popular technique for fixed-design error-in-variables regression, a generalization of the linear regression setting in which the observed covariates are corrupted with random noise. We provide the…

Machine Learning · Computer Science 2024-08-06 Anish Agarwal , Keegan Harris , Justin Whitehouse , Zhiwei Steven Wu

A wide range of respiratory diseases, such as cold and flu, asthma, and COVID-19, affect people's daily lives worldwide. In medical practice, respiratory sounds are widely used in medical services to diagnose various respiratory illnesses…

Sound · Computer Science 2024-06-21 Asmaa Shati , Ghulam Mubashar Hassan , Amitava Datta

Self-supervised methods such as Contrastive predictive Coding (CPC) have greatly improved the quality of the unsupervised representations. These representations significantly reduce the amount of labeled data needed for downstream task…

Audio and Speech Processing · Electrical Eng. & Systems 2023-04-27 Saurabhchand Bhati , Jesús Villalba , Piotr Żelasko , Laureano Moro-Velazquez , Najim Dehak

Randomization tests are widely used to generate finite-sample valid $p$-values for causal inference on experimental data. However, when applied to subgroup analysis, these tests may lack power due to small subgroup sizes. Incorporating a…

Methodology · Statistics 2025-08-01 Yao Zhang , Zijun Gao

The heart sound signals (Phonocardiogram - PCG) enable the earliest monitoring to detect a potential cardiovascular pathology and have recently become a crucial tool as a diagnostic test in outpatient monitoring to assess heart hemodynamic…

Signal Processing · Electrical Eng. & Systems 2019-02-21 Serkan Kiranyaz , Morteza Zabihi , Ali Bahrami Rad , Anas Tahir , Turker Ince , Ridha Hamila , Moncef Gabbouj

The fundamental task of group testing is to recover a small distinguished subset of items from a large population while efficiently reducing the total number of tests (measurements). The key contribution of this paper is in adopting a new…

Information Theory · Computer Science 2015-03-13 George Kamal Atia , Venkatesh Saligrama

We propose a novel group testing method, termed semi-quantitative group testing, motivated by a class of problems arising in genome screening experiments. Semi-quantitative group testing (SQGT) is a (possibly) non-binary pooling scheme that…

Information Theory · Computer Science 2015-05-28 Amin Emad , Olgica Milenkovic

In diagnostic studies, researchers frequently encounter imperfect reference standards with some misclassified labels. Treating these as gold standards can bias receiver operating characteristic (ROC) curve analysis. To address this issue,…

Methodology · Statistics 2025-02-13 Yifan Sun , Peijun Sang , Qinglong Tian , Pengfei Li

Physicians taking care of patients with coronavirus disease (COVID-19) have described different changes in routine blood parameters. However, these changes, hinder them from performing COVID-19 diagnosis. We constructed a machine learning…

Fast and affordable solutions for COVID-19 testing are necessary to contain the spread of the global pandemic and help relieve the burden on medical facilities. Currently, limited testing locations and expensive equipment pose difficulties…

Sound · Computer Science 2021-03-18 Ahmed Fakhry , Xinyi Jiang , Jaclyn Xiao , Gunvant Chaudhari , Asriel Han , Amil Khanzada

Recent advances in noiseless non-adaptive group testing have led to a precise asymptotic characterization of the number of tests required for high-probability recovery in the sublinear regime $k = n^{\theta}$ (with $\theta \in (0,1)$), with…

Data Structures and Algorithms · Computer Science 2021-12-24 Oliver Gebhard , Max Hahn-Klimroth , Olaf Parczyk , Manuel Penschuck , Maurice Rolvien , Jonathan Scarlett , Nelvin Tan

Timing systems based on Analog-to-Digital Converters are widely used in the design of previous high energy physics detectors. In this paper, we propose a new method based on deep learning to extract the time information from a finite set of…

Data Analysis, Statistics and Probability · Physics 2019-04-02 Pengcheng Ai , Dong Wang , Guangming Huang , Ni Fang , Deli Xu , Fan Zhang

Adaptive measurements were recently shown to significantly improve the performance of quantum state tomography. Utilizing information about the system for the on-line choice of optimal measurements allows to reach the ultimate bounds of…

The current COVID-19 pandemic overloads healthcare systems, including radiology departments. Though several deep learning approaches were developed to assist in CT analysis, nobody considered study triage directly as a computer science…

This paper presents our solution for the 2nd COVID-19 Severity Detection Competition. This task aims to distinguish the Mild, Moderate, Severe, and Critical grades in COVID-19 chest CT images. In our approach, we devise a novel…

Image and Video Processing · Electrical Eng. & Systems 2022-12-02 Junlin Hou , Jilan Xu , Nan Zhang , Yuejie Zhang , Xiaobo Zhang , Rui Feng