Related papers: Graph Homomorphism Polynomials: Algorithms and Com…
We first prove a one-to-one correspondence between finding Hamiltonian cycles in a cubic planar graphs and finding trees with specific properties in dual graphs. Using this information, we construct an exact algorithm for finding…
Graph isomorphism is an important computer science problem. The problem for the general case is unknown to be in polynomial time. The base algorithm for the general case works in quasi-polynomial time. The solutions in polynomial time for…
Counting homomorphisms of a constant sized pattern graph $H$ in an input graph $G$ is a fundamental computational problem. There is a rich history of studying the complexity of this problem, under various constraints on the input $G$ and…
We introduce new methods for understanding the topology of $\Hom$ complexes (spaces of homomorphisms between two graphs), mostly in the context of group actions on graphs and posets. We view $\Hom(T,-)$ and $\Hom(-,G)$ as functors from…
A hallmark of graph neural networks is their ability to distinguish the isomorphism class of their inputs. This study derives hardness results for the classification variant of graph isomorphism in the message-passing model (MPNN). MPNN…
A dominating set of a graph is a set of vertices such that every vertex not in the set has at least one neighbor in the set. The problem of counting dominating sets is #P-complete for chordal graphs but solvable in polynomial time for its…
An ordered graph is a graph enhanced with a linear order on the vertex set. An ordered graph is a core if it does not have an order-preserving homomorphism to a proper subgraph. We say that $H$ is the core of $G$ if (i) $H$ is a core, (ii)…
Graph spectra are an important class of structural features on graphs that have shown promising results in enhancing Graph Neural Networks (GNNs). Despite their widespread practical use, the theoretical understanding of the power of…
A new heuristic based on vertex invariants is developed to rapidly distinguish non-isomorphic graphs to a desired level of accuracy. The method is applied to sample subgraphs from an E.coli protein interaction network, and as a probe for…
The notion of treewidth, introduced by Robertson and Seymour in their seminal Graph Minors series, turned out to have tremendous impact on graph algorithmics. Many hard computational problems on graphs turn out to be efficiently solvable in…
We consider the problem of finding a Hamiltonian path with precedence constraints in the form of a partial order on the vertex set. This problem is known as Partially Ordered Hamiltonian Path Problem (POHPP). Here, we study the complexity…
The Longest Path Problem is a question of finding the maximum length between pairs of vertices of a graph. In the general case, the problem is NP-complete. However, there is a small collection of graph classes for which there exists an…
An edge-weighted graph $G$, possibly with loops, is said to be antiferromagnetic if it has nonnegative weights and at most one positive eigenvalue, counting multiplicities. The number of graph homomorphisms from a graph $H$ to an…
We consider Colouring on graphs that are $H$-subgraph-free for some fixed graph $H$, which are graphs that do not contain $H$ as a subgraph. To classify the complexity of Colouring on $H$-subgraph-free graphs for connected $H$, it remains…
Motivated by applications in social and biological network analysis, we introduce a new form of agnostic clustering termed~\emph{motif correlation clustering}, which aims to minimize the cost of clustering errors associated with both edges…
We study the family of intersection graphs of low density objects in low dimensional Euclidean space. This family is quite general, and includes planar graphs. We prove that such graphs have small separators. Next, we present efficient…
Firstly, for a general graph, we find a recursion formula on the number of Hamiltonian cycles and one on cycles. By this result, we give some new polynomial invariants. Secondly, we give a condition to tell whether a polynomial defined by…
Affordable, high-quality whole-genome assemblies have made it possible to construct rich pangenomes that capture haplotype diversity across many species. As these datasets grow, they motivate the development of specialized techniques…
In this work we develop a theory of hierarchical clustering for graphs. Our modeling assumption is that graphs are sampled from a graphon, which is a powerful and general model for generating graphs and analyzing large networks. Graphons…
Polygraphs are a higher-dimensional generalization of the notion of directed graph. Based on those as unifying concept, this monograph on polygraphs revisits the theory of rewriting in the context of strict higher categories, adopting the…