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A semi-parametric, non-linear regression model in the presence of latent variables is applied towards learning network graph structure. These latent variables can correspond to unmodeled phenomena or unmeasured agents in a complex system of…

Machine Learning · Statistics 2018-07-03 Jonathan Mei , José M. F. Moura

Topological neural networks (TNNs) are information processing architectures that model representations from data lying over topological spaces (e.g., simplicial or cell complexes) and allow for decentralized implementation through localized…

Information Theory · Computer Science 2025-02-17 Simone Fiorellino , Claudio Battiloro , Paolo Di Lorenzo

Many community detection algorithms require the introduction of a measure on the set of nodes. Previously, a lot of efforts have been made to find the top-performing measures. In most cases, experiments were conducted on several datasets or…

Social and Information Networks · Computer Science 2021-11-03 Rinat Aynulin

Time series models are ubiquitous in science, arising in any situation where researchers seek to understand how a system's behaviour changes over time. A key problem in time series modelling is \emph{inference}; determining properties of…

Mathematical Software · Computer Science 2020-01-13 Michael Clerx , Martin Robinson , Ben Lambert , Chon Lok Lei , Sanmitra Ghosh , Gary R. Mirams , David J. Gavaghan

We present and analyze a topologically induced transition from ordered, synchronized to disordered dynamics in directed networks of oscillators. The analysis reveals where in the space of networks this transition occurs and its underlying…

Disordered Systems and Neural Networks · Physics 2007-05-23 Marc Timme

Methods of topological data analysis have been successfully applied in a wide range of fields to provide useful summaries of the structure of complex data sets in terms of topological descriptors, such as persistence diagrams. While there…

Algebraic Topology · Mathematics 2020-12-08 Lida Kanari , Adélie Garin , Kathryn Hess

Understanding the behavior of a trained network and finding explanations for its outputs is important for improving the network's performance and generalization ability, and for ensuring trust in automated systems. Several approaches have…

Computation and Language · Computer Science 2018-08-30 Madhumita Sushil , Simon Šuster , Walter Daelemans

We explore the problem of inferring the graph Laplacian of a weighted, undirected network from snapshots of a single or multiple discrete-time consensus dynamics, subject to parameter uncertainty, taking place on the network. Specifically,…

Social and Information Networks · Computer Science 2020-05-08 Yu Zhu , Michael T. Schaub , Ali Jadbabaie , Santiago Segarra

Networks represent relationships between entities in many complex systems, spanning from online social interactions to biological cell development and brain connectivity. In many cases, relationships between entities are unambiguously…

Social and Information Networks · Computer Science 2018-01-23 Ivan Brugere , Brian Gallagher , Tanya Y. Berger-Wolf

Inference of gene regulatory networks has been an active area of research for around 20 years, leading to the development of sophisticated inference algorithms based on a variety of assumptions and approaches. With the always increasing…

Molecular Networks · Quantitative Biology 2022-11-03 Malvina Marku , Vera Pancaldi

Network inference is the process of learning the properties of complex networks from data. Besides using information about known links in the network, node attributes and other forms of network metadata can help to solve network inference…

Data Analysis, Statistics and Probability · Physics 2021-03-29 Oscar Fajardo-Fontiveros , Marta Sales-Pardo , Roger Guimera

Despite the success of the carefully-annotated benchmarks, the effectiveness of existing graph neural networks (GNNs) can be considerably impaired in practice when the real-world graph data is noisily labeled. Previous explorations in…

Machine Learning · Computer Science 2024-08-30 Yuhao Wu , Jiangchao Yao , Xiaobo Xia , Jun Yu , Ruxin Wang , Bo Han , Tongliang Liu

This paper introduces a probabilistic approach for tracking the dynamics of unweighted and directed graphs using state-space models (SSMs). Unlike conventional topology inference methods that assume static graphs and generate point-wise…

Signal Processing · Electrical Eng. & Systems 2024-09-13 Victor M. Tenorio , Elvin Isufi , Geert Leus , Antonio G. Marques

Control and characterization of networks is a paramount step for the development of many quantum technologies. Even for moderate-sized networks, this amounts to explore an extremely vast parameters space in search for the couplings defining…

Quantum Physics · Physics 2024-05-30 Claudia Benedetti , Ilaria Gianani

Despite recent progress in our understanding of complex dynamic networks, it remains challenging to devisesufficiently accurate models to observe, control or predict the state of real systems in biology, economics or other fields. A largely…

Dynamical Systems · Mathematics 2019-12-11 Dominik Kahl , Philipp Wendland , Matthias Neidhardt , Andreas Weber , Maik Kschischo

Networked systems display complex patterns of interactions between a large number of components. In physical networks, these interactions often occur along structural connections that link components in a hard-wired connection topology,…

Neurons and Cognition · Quantitative Biology 2018-04-03 Jason Kim , Jonathan M. Soffer , Ari E. Kahn , Jean M. Vettel , Fabio Pasqualetti , Danielle S. Bassett

Typical topology optimization methods require complex iterative calculations, which cannot meet the requirements of fast computing applications. The neural network is studied to reduce the time of computing the optimization result, however,…

Computational Physics · Physics 2024-01-12 Ce Guan , Jianyu Zhang , Zhen Li , Yongbo Deng

Network intrusion detection is the process of identifying malicious behaviors that target a network and its resources. Current systems implementing intrusion detection processes observe traffic at several data collecting points in the…

Cryptography and Security · Computer Science 2015-09-16 Michel Toulouse , Bui Quang Minh , Philip Curtis

Our current understanding about the AS level topology of the Internet is based on measurements and inductive-type models which set up rules describing the behavior (node and edge dynamics) of the individual ASes and generalize the…

Networking and Internet Architecture · Computer Science 2015-12-11 Dávid Szabó , Attila Kőrösi , József Bíró , András Gulyás

This paper presents a neural scheme for the topology-aware interpolation of time-varying scalar fields. Given a time-varying sequence of persistence diagrams, along with a sparse temporal sampling of the corresponding scalar fields, denoted…

Machine Learning · Computer Science 2025-11-24 Mohamed Kissi , Keanu Sisouk , Joshua A. Levine , Julien Tierny