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Understanding and leveraging the 3D structures of proteins is central to a variety of biological and drug discovery tasks. While deep learning has been applied successfully for structure-based protein function prediction tasks, current…

Machine Learning · Computer Science 2024-04-03 Rong Han , Wenbing Huang , Lingxiao Luo , Xinyan Han , Jiaming Shen , Zhiqiang Zhang , Jun Zhou , Ting Chen

A rapidly growing amount of content posted online, such as food recipes, opens doors to new exciting applications at the intersection of vision and language. In this work, we aim to estimate the calorie amount of a meal directly from an…

Computer Vision and Pattern Recognition · Computer Science 2020-11-03 Robin Ruede , Verena Heusser , Lukas Frank , Alina Roitberg , Monica Haurilet , Rainer Stiefelhagen

We analyze a model problem representing a multi-electronic molecule sitting on a metal surface. Working with a reduced configuration interaction Hamiltonian, we show that one can extract very accurate ground state wavefunctions as compared…

Chemical Physics · Physics 2020-09-24 Junhan Chen , Zuxin Jin , Wenjie Dou , Joseph Subotnik

Machine learning techniques have received growing attention as an alternative strategy for developing general-purpose density functional approximations, augmenting the historically successful approach of human designed functionals derived…

Chemical Physics · Physics 2022-11-23 Kanun Pokharel , James W. Furness , Yi Yao , Volker Blum , Tom J. P. Irons , Andrew M. Teale , Jianwei Sun

Ionic mobility determines the rate performance of several applications, such as batteries, fuel cells, and electrochemical sensors and is exponentially dependent on the migration barrier ($E_m$), a difficult to measure/calculate quantity.…

Materials Science · Physics 2026-02-16 Reshma Devi , Keith T. Butler , Gopalakrishnan Sai Gautam

Representing and reasoning about 3D structures of macromolecules is emerging as a distinct challenge in machine learning. Here, we extend recent work on geometric vector perceptrons and apply equivariant graph neural networks to a wide…

Machine Learning · Computer Science 2021-07-14 Bowen Jing , Stephan Eismann , Pratham N. Soni , Ron O. Dror

The development of efficient machine learning models for molecular systems representation is becoming crucial in scientific research. We introduce TensorNet, an innovative O(3)-equivariant message-passing neural network architecture that…

Machine Learning · Computer Science 2023-10-31 Guillem Simeon , Gianni de Fabritiis

Quantum machine learning algorithms have emerged to be a promising alternative to their classical counterparts as they leverage the power of quantum computers. Such algorithms have been developed to solve problems like electronic structure…

Chemical Physics · Physics 2021-10-29 Manas Sajjan , Shree Hari Sureshbabu , Sabre Kais

Recent advances in machine-learning interatomic potentials have enabled the efficient modeling of complex atomistic systems with an accuracy that is comparable to that of conventional quantum mechanics based methods. At the same time, the…

Materials Science · Physics 2021-05-06 April M. Miksch , Tobias Morawietz , Johannes Kästner , Alexander Urban , Nongnuch Artrith

Deep energy-based models are powerful, but pose challenges for learning and inference (Belanger and McCallum, 2016). Tu and Gimpel (2018) developed an efficient framework for energy-based models by training "inference networks" to…

Computation and Language · Computer Science 2020-10-13 Lifu Tu , Richard Yuanzhe Pang , Kevin Gimpel

Prediction for ADMET (Absorption, Distribution, Metabolism, Excretion, and Toxicity) plays a crucial role in drug discovery and development, accelerating the screening and optimization of new drugs. Existing methods primarily rely on…

Machine Learning · Computer Science 2025-09-08 Han Zhang , Fengji Ma , Jiamin Su , Xinyue Yang , Lei Wang , Wen-Cai Ye , Li Liu

Atomistic modeling of energetic disorder in organic semiconductors (OSCs) and its effects on the optoelectronic properties of OSCs requires a large number of excited-state electronic-structure calculations, a computationally daunting task…

Chemical Physics · Physics 2021-05-10 Chengqiang Lu , Qi Liu , Qiming Sun , Chang-Yu Hsieh , Shengyu Zhang , Liang Shi , Chee-Kong Lee

Over the past decade inter-atomic potentials based on machine-learning (ML) techniques have become an indispensable tool in the atomic-scale modeling of materials. Trained on energies and forces obtained from electronic-structure…

Materials Science · Physics 2022-08-15 Michele Ceriotti

We introduce a novel method that enables parameter-efficient transfer and multi-task learning with deep neural networks. The basic approach is to learn a model patch - a small set of parameters - that will specialize to each task, instead…

Machine Learning · Computer Science 2019-02-26 Pramod Kaushik Mudrakarta , Mark Sandler , Andrey Zhmoginov , Andrew Howard

Multi-task learning (MTL) is an inductive transfer mechanism designed to leverage useful information from multiple tasks to improve generalization performance compared to single-task learning. It has been extensively explored in traditional…

Machine Learning · Computer Science 2025-01-13 Varun Kumar , Somdatta Goswami , Katiana Kontolati , Michael D. Shields , George Em Karniadakis

Electron density prediction stands as a cornerstone challenge in molecular systems, pivotal for various applications such as understanding molecular interactions and conducting precise quantum mechanical calculations. However, the scaling…

Chemical Physics · Physics 2024-10-10 Ilan Mitnikov , Joseph Jacobson

Multitask learning is a common approach in machine learning, which allows to train multiple objectives with a shared architecture. It has been shown that by training multiple tasks together inference time and compute resources can be saved,…

Computer Vision and Pattern Recognition · Computer Science 2021-09-13 Falk Heuer , Sven Mantowsky , Syed Saqib Bukhari , Georg Schneider

Understanding material surfaces and interfaces is vital in applications like catalysis or electronics. By combining energies from electronic structure with statistical mechanics, ab initio simulations can in principle predict the structure…

Energy-based models (EBMs) have experienced a resurgence within machine learning in recent years, including as a promising alternative for probabilistic regression. However, energy-based regression requires a proposal distribution to be…

Machine Learning · Computer Science 2023-11-08 Fredrik K. Gustafsson , Martin Danelljan , Thomas B. Schön

This paper explores learned-context neural networks. It is a multi-task learning architecture based on a fully shared neural network and an augmented input vector containing trainable task parameters. The architecture is interesting due to…

Machine Learning · Computer Science 2025-08-07 Anders T. Sandnes , Bjarne Grimstad , Odd Kolbjørnsen
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