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This paper presents novel single and multi-shell sampling schemes for diffusion MRI. In diffusion MRI, it is paramount that the number of samples is as small as possible in order that scan times are practical in a clinical setting. The…

Signal Processing · Electrical Eng. & Systems 2019-02-01 Alice P. Bates , Zubair Khalid , Jason D. McEwen , Rodney A. Kennedy , Alessandro Daducci , Erick J. Canales-Rodríguez

We introduce a new coarse-graining algorithm, tensor network skeletonization, for the numerical computation of tensor networks. This approach utilizes a structure-preserving skeletonization procedure to remove short-range correlations…

Numerical Analysis · Mathematics 2016-07-05 Lexing Ying

Fetal brain MRI relies on rapid multi-view 2D slice acquisitions to reduce motion artifacts caused by fetal movement. However, these stacks are typically low resolution, may suffer from motion corruption, and do not adequately capture 3D…

Computer Vision and Pattern Recognition · Computer Science 2025-09-15 Ema Masterl , Tina Vipotnik Vesnaver , Žiga Špiclin

Reconstructing complex structures from planar cross-sections is a challenging problem, with wide-reaching applications in medical imaging, manufacturing, and topography. Out-of-the-box point cloud reconstruction methods can often fail due…

Computer Vision and Pattern Recognition · Computer Science 2025-03-26 Thomas Walker , Salvatore Esposito , Daniel Rebain , Amir Vaxman , Arno Onken , Changjian Li , Oisin Mac Aodha

Accurate reconstruction of plant phenotypes plays a key role in optimising sustainable farming practices in the field of Precision Agriculture (PA). Currently, optical sensor-based approaches dominate the field, but the need for…

Computer Vision and Pattern Recognition · Computer Science 2024-03-29 Kewei Hu , Ying Wei , Yaoqiang Pan , Hanwen Kang , Chao Chen

Resting-state functional Magnetic Resonance Imaging (fMRI) is a powerful imaging technique for studying functional development of the brain in utero. However, unpredictable and excessive movement of fetuses have limited its clinical…

3D recovery from multi-stereo and stereo images, as an important application of the image-based perspective geometry, serves many applications in computer vision, remote sensing and Geomatics. In this chapter, the authors utilize the…

Computer Vision and Pattern Recognition · Computer Science 2021-06-29 Rongjun Qin , Shuang Song , Xiao Ling , Mostafa Elhashash

In this paper, we propose a model-driven method that reconstructs LoD-2 building models following a "decomposition-optimization-fitting" paradigm. The proposed method starts building detection results through a deep learning-based detector…

Computer Vision and Pattern Recognition · Computer Science 2021-09-10 Shengxi Gui , Rongjun Qin

Image registration between histology and magnetic resonance imaging (MRI) is a challenging task due to differences in structural content and contrast. Too thick and wide specimens cannot be processed all at once and must be cut into smaller…

Computer Vision and Pattern Recognition · Computer Science 2017-08-29 Jonas Pichat , Juan Eugenio Iglesias , Sotiris Nousias , Tarek Yousry , Sebastien Ourselin , Marc Modat

Nowadays, there are many approaches to acquire three-dimensional (3D) point clouds of maize plants. However, automatic stem-leaf segmentation of maize shoots from three-dimensional (3D) point clouds remains challenging, especially for new…

Computer Vision and Pattern Recognition · Computer Science 2020-09-08 Chao Zhu , Teng Miao , Tongyu Xu , Tao Yang , Na Li

We develop an algorithm for reconstruction of elastic strain fields from their Longitudinal Ray Transform (LRT) in either two or three dimensions. In general, the LRT only determines the solenoidal part of a symmetric tensor field, but…

Numerical Analysis · Mathematics 2024-08-21 Chris Wensrich , Sean Holman , William Lionheart , Matias Courdurier , Anna Polyakova , Ivan Svetov , Ty Doubikin

Reconstructing object geometry and material from multiple views typically requires optimization. Differentiable path tracing is an appealing framework as it can reproduce complex appearance effects. However, it is difficult to use due to…

Computer Vision and Pattern Recognition · Computer Science 2020-12-09 Purvi Goel , Loudon Cohen , James Guesman , Vikas Thamizharasan , James Tompkin , Daniel Ritchie

Volumetric reconstruction of fetal brains from multiple stacks of MR slices, acquired in the presence of almost unpredictable and often severe subject motion, is a challenging task that is highly sensitive to the initialization of…

Image and Video Processing · Electrical Eng. & Systems 2022-06-23 Junshen Xu , Daniel Moyer , P. Ellen Grant , Polina Golland , Juan Eugenio Iglesias , Elfar Adalsteinsson

An optimization-based strategy is proposed for coupling three-dimensional and one-dimensional problems (3D-1D coupling) in the context of soil-root interaction simulations. This strategy, originally designed to tackle generic 3D-1D coupled…

Numerical Analysis · Mathematics 2024-12-18 Stefano Berrone , Stefano Ferraris , Denise Grappein , Gioana Teora , Fabio Vicini

Physical exercise is an essential component of rehabilitation programs that improve quality of life and reduce mortality and re-hospitalization rates. In AI-driven virtual rehabilitation programs, patients complete their exercises…

Computer Vision and Pattern Recognition · Computer Science 2023-04-20 Ali Abedi , Paritosh Bisht , Riddhi Chatterjee , Rachit Agrawal , Vyom Sharma , Dinesh Babu Jayagopi , Shehroz S. Khan

A software for processing sets of full-color images of biological tissue histological sections is developed. We used histological sections obtained by the method of high-precision layer-by-layer grinding of frozen biological tissues. The…

Phase retrieval, a nonlinear problem prevalent in imaging applications, has been extensively studied using random models, some of which with i.i.d. sensing matrix components. While these models offer robust reconstruction guarantees, they…

Optics · Physics 2024-09-10 Zhiyuan Hu , Julián Tachella , Michael Unser , Jonathan Dong

In radial fast spin-echo MRI, a set of overlapping spokes with an inconsistent T2 weighting is acquired, which results in an averaged image contrast when employing conventional image reconstruction techniques. This work demonstrates that…

Medical Physics · Physics 2016-03-02 Kai Tobias Block , Martin Uecker , Jens Frahm

For diagnosis of shoulder illness, it is essential to look at the morphology deviation of scapula and humerus from the medical images that are acquired from Magnetic Resonance (MR) imaging. However, taking high-resolution MR images is…

Image and Video Processing · Electrical Eng. & Systems 2022-03-16 Xiaoxiao He , Chaowei Tan , Virak Tan , Kang Li

We present a novel method for characterizing the microstructure of a material from volumetric datasets such as 3D image data from computed tomography (CT). The method is based on a new statistical model for the distribution of voxel…

Materials Science · Physics 2021-01-06 Elise Otterlei Brenne , Vedrana Andersen Dahl , Peter Stanley Jørgensen