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As the number of open and shared scientific datasets on the Internet increases under the open science movement, efficiently retrieving these datasets is a crucial task in information retrieval (IR) research. In recent years, the development…

Information Retrieval · Computer Science 2023-03-31 Xintao Chu , Jianping Liu , Jian Wang , Xiaofeng Wang , Yingfei Wang , Meng Wang , Xunxun Gu

Named entity recognition (NER) of chemicals and drugs is a critical domain of information extraction in biochemical research. NER provides support for text mining in biochemical reactions, including entity relation extraction, attribute…

Computation and Language · Computer Science 2020-12-22 Jian Liu , Lei Gao , Sujie Guo , Rui Ding , Xin Huang , Long Ye , Qinghua Meng , Asef Nazari , Dhananjay Thiruvady

Named Entity Recognition (NER) is a challenging and widely studied task that involves detecting and typing entities in text. So far,NER still approaches entity typing as a task of classification into universal classes (e.g. date, person, or…

Computation and Language · Computer Science 2023-02-22 Tristan Luiggi , Laure Soulier , Vincent Guigue , Siwar Jendoubi , Aurélien Baelde

Named Entity Recognition (NER) is a fundamental problem in natural language processing (NLP). However, the task of extracting longer entity spans (e.g., awards) from extended texts (e.g., homepages) is barely explored. Current NER methods…

Computation and Language · Computer Science 2025-02-12 Yelin Chen , Fanjin Zhang , Jie Tang

Named entity recognition (NER) is the task to detect and classify the entity spans in the text. When entity spans overlap between each other, this problem is named as nested NER. Span-based methods have been widely used to tackle the nested…

Computation and Language · Computer Science 2022-09-16 Hang Yan , Yu Sun , Xiaonan Li , Xipeng Qiu

Identifying suitable datasets for a research question remains challenging because existing dataset search engines rely heavily on metadata quality and keyword overlap, which often fail to capture the semantic intent of scientific…

Digital Libraries · Computer Science 2026-01-09 Zhiyin Tan , Changxu Duan

Previous work has demonstrated that AI methods for analysing scientific literature benefit significantly from annotating sentences in papers according to their rhetorical roles, such as research gaps, results, limitations, extensions of…

Computation and Language · Computer Science 2026-02-11 Francisco Bolaños , Angelo Salatino , Francesco Osborne , Enrico Motta

This study investigates the automation of meta-analysis in scientific documents using large language models (LLMs). Meta-analysis is a robust statistical method that synthesizes the findings of multiple studies support articles to provide a…

Computation and Language · Computer Science 2024-11-19 Jawad Ibn Ahad , Rafeed Mohammad Sultan , Abraham Kaikobad , Fuad Rahman , Mohammad Ruhul Amin , Nabeel Mohammed , Shafin Rahman

Named Entity Recognition (NER) is an important subtask of information extraction that seeks to locate and recognise named entities. Despite recent achievements, we still face limitations in correctly detecting and classifying entities,…

Information Retrieval · Computer Science 2018-09-07 Diego Esteves

In recent years, Deep Learning (DL) models are becoming important due to their demonstrated success at overcoming complex learning problems. DL models have been applied effectively for different Natural Language Processing (NLP) tasks such…

Computation and Language · Computer Science 2019-11-06 Hamada A. Nayel , Shashrekha H. L

Existing scholarly information extraction (SIE) datasets focus on scientific papers and overlook implementation-level details in code repositories. README files describe datasets, source code, and other implementation-level artifacts,…

Computation and Language · Computer Science 2026-03-09 Genet Asefa Gesese , Zongxiong Chen , Shufan Jiang , Mary Ann Tan , Zhaotai Liu , Sonja Schimmler , Harald Sack

Named Entity Recognition (NER) is an important subtask of information extraction that seeks to locate and recognise named entities. Despite recent achievements, we still face limitations with correctly detecting and classifying entities,…

Information Retrieval · Computer Science 2017-10-31 Diego Esteves , Rafael Peres , Jens Lehmann , Giulio Napolitano

Entity Recognition (ER) within a text is a fundamental exercise in Natural Language Processing, enabling further depending tasks such as Knowledge Extraction, Text Summarisation, or Keyphrase Extraction. An entity consists of single words…

Computation and Language · Computer Science 2021-06-14 Andreas Waldis , Luca Mazzola

Scientific document embeddings contain a variety of rich features which can be harnessed for downstream tasks such as recommendation, ranking, and clustering. We explore which tangible insights can be drawn from scientific document…

Digital Libraries · Computer Science 2025-06-11 Brian D. Zimmerman , Joshua Folkins , Olga Vechtomova

Here we present the training and evaluation of NanoNER, a Named Entity Recognition (NER) model for Nanobiology. NER consists in the identification of specific entities in spans of unstructured texts and is often a primary task in Natural…

Information Retrieval · Computer Science 2024-02-07 Martin Lentschat , Cyril Labbé , Ran Cheng

Named entity recognition (NER) is a fundamental part of extracting information from documents in biomedical applications. A notable advantage of NER is its consistency in extracting biomedical entities in a document context. Although…

Computation and Language · Computer Science 2022-10-25 Minbyul Jeong , Jaewoo Kang

To extract essential information from complex data, computer scientists have been developing machine learning models that learn low-dimensional representation mode. From such advances in machine learning research, not only computer…

Artificial Intelligence · Computer Science 2024-06-18 Akira Matsui , Emilio Ferrara

The exponential growth of online textual content across diverse domains has necessitated advanced methods for automated text classification. Large Language Models (LLMs) based on transformer architectures have shown significant success in…

Computation and Language · Computer Science 2025-09-09 Zhyar Rzgar K Rostam , Gábor Kertész

In the era of explosive growth in academic literature, the burden of literature review on scholars are increasing. Proactively recommending academic papers that align with scholars' literature needs in the research process has become one of…

Information Retrieval · Computer Science 2026-01-28 Haixu Xi , Heng Zhang , Chengzhi Zhang

Named Entity Recognition (NER) is an important task in natural language processing that aims to identify and extract key entities from unstructured text. We present a novel application of NER in plasma physics research articles and address…

Computation and Language · Computer Science 2026-02-13 Muhammad Haris , Hans Höft , Markus M. Becker , Markus Stocker