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Understanding the complexity of biological neural networks like the human brain is one of the scientific challenges of our century. The organization of the brain can be described at different levels, ranging from small neural networks to…

Neurons and Cognition · Quantitative Biology 2018-05-23 Stefano De Blasi

We propose a multi-tone decomposition algorithm that can find the frequencies, amplitudes and phases of the fundamental sinusoids in a noisy observation sequence. Under independent identically distributed Gaussian noise, our method utilizes…

Signal Processing · Electrical Eng. & Systems 2022-03-29 Kaan Gokcesu , Hakan Gokcesu

Artificial neural networks which are inspired from the learning mechanism of brain have achieved great successes in many problems, especially those with deep layers. In this paper, we propose a nucleus neural network (NNN) and corresponding…

Computer Vision and Pattern Recognition · Computer Science 2019-05-15 Jia Liu , Maoguo Gong , Haibo He

Deep neural networks are vulnerable to adversarial attacks and hard to interpret because of their black-box nature. The recently proposed invertible network is able to accurately reconstruct the inputs to a layer from its outputs, thus has…

Machine Learning · Computer Science 2019-10-16 Juntang Zhuang , Nicha C. Dvornek , Xiaoxiao Li , Junlin Yang , James S. Duncan

The human brain can be considered to be a graphical structure comprising of tens of billions of biological neurons connected by synapses. It has the remarkable ability to automatically re-route information flow through alternate paths in…

Machine Learning · Computer Science 2022-08-26 Hang Li , Qadeer Khan , Volker Tresp , Daniel Cremers

Despite the widespread adoption of Backpropagation algorithm-based Deep Neural Networks, the biological infeasibility of the BP algorithm could potentially limit the evolution of new DNN models. To find a biologically plausible algorithm to…

Neural and Evolutionary Computing · Computer Science 2024-02-29 Jian-Hui Chen , Cheng-Lin Liu , Zuoren Wang

Cellular neural circuit and networks consisting of interconnected neurons and glia are ulti- mately responsible for the information processing associated with information processing in the brain. While there are major efforts aimed at…

Neurons and Cognition · Quantitative Biology 2015-05-18 Marius Buibas , Gabriel A. Silva

Link prediction is one of the fundamental problems in network analysis. In many applications, notably in genetics, a partially observed network may not contain any negative examples of absent edges, which creates a difficulty for many…

Machine Learning · Statistics 2013-01-30 Yunpeng Zhao , Elizaveta Levina , Ji Zhu

High quality explanations of neural networks (NNs) should exhibit two key properties. Completeness ensures that they accurately reflect a network's function and interpretability makes them understandable to humans. Many existing methods…

Machine Learning · Computer Science 2025-03-20 Nolan Dey , Eric Taylor , Alexander Wong , Bryan Tripp , Graham W. Taylor

We introduce noisy beeping networks, where nodes have limited communication capabilities, namely, they can only emit energy or sense the channel for energy. Furthermore, imperfections may cause devices to malfunction with some fixed…

Data Structures and Algorithms · Computer Science 2022-08-04 Yagel Ashkenazi , Ran Gelles , Amir Leshem

We consider independent component analysis of binary data. While fundamental in practice, this case has been much less developed than ICA for continuous data. We start by assuming a linear mixing model in a continuous-valued latent space,…

Machine Learning · Computer Science 2022-08-03 Antti Hyttinen , Vitória Barin-Pacela , Aapo Hyvärinen

Reconstructing the states of the nodes of a dynamical network is a problem of fundamental importance in the study of neuronal and genetic networks. An underlying related problem is that of observability, i.e., identifying the conditions…

Pattern Formation and Solitons · Physics 2017-03-31 Afroza Shirin , Dionicio F. Rios , Francesco Sorrentino

Significant challenges exist in efficient data analysis of most advanced experimental and observational techniques because the collected signals often include unwanted contributions--such as background and signal distortions--that can…

Computer Vision and Pattern Recognition · Computer Science 2025-07-08 Yuan Ni , Zhantao Chen , Alexander N. Petsch , Edmund Xu , Cheng Peng , Alexander I. Kolesnikov , Sugata Chowdhury , Arun Bansil , Jana B. Thayer , Joshua J. Turner

Hierarchical feature discovery using non-spiking convolutional neural networks (CNNs) has attracted much recent interest in machine learning and computer vision. However, it is still not well understood how to create a biologically…

Neural and Evolutionary Computing · Computer Science 2017-06-27 Amirhossein Tavanaei , Anthony S. Maida

Biological image processing is performed by complex neural networks composed of thousands of neurons interconnected via thousands of synapses, some of which are excitatory and others inhibitory. Spiking neural models are distinguished from…

Neural and Evolutionary Computing · Computer Science 2019-09-19 Pedro Machado , Georgina Cosma , T. M McGinnity

Brain networks exhibit complications such as noise, neuron failures, and partial synaptic connectivity. These can make it difficult to model and analyze their behavior. This paper describes a way to address this difficulty, namely, breaking…

Data Structures and Algorithms · Computer Science 2025-03-25 Nancy Lynch

Classic algorithms and machine learning systems like neural networks are both abundant in everyday life. While classic computer science algorithms are suitable for precise execution of exactly defined tasks such as finding the shortest path…

Machine Learning · Computer Science 2022-09-02 Felix Petersen

The single-layer feedforward neural network with random weights is a recurring motif in the neural networks literature. The advantage of these networks is their simplified training, which reduces to solving a ridge-regression problem. A…

Machine Learning · Computer Science 2025-02-25 M. Andrecut

Recent genomic and bioinformatic advances have motivated the development of numerous random network models purporting to describe graphs of biological, technological, and sociological origin. The success of a model has been evaluated by how…

Molecular Networks · Quantitative Biology 2007-05-23 Manuel Middendorf , Etay Ziv , Carter Adams , Jen Hom , Robin Koytcheff , Chaya Levovitz , Gregory Woods , Linda Chen , Chris Wiggins

Mechanistic Interpretability aims to reverse engineer the algorithms implemented by neural networks by studying their weights and activations. An obstacle to reverse engineering neural networks is that many of the parameters inside a…