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High-dimensional multiplex graphs are characterized by their high number of complementary and divergent dimensions. The existence of multiple hierarchical latent relations between the graph dimensions poses significant challenges to…

Machine Learning · Computer Science 2025-01-30 Kamel Abdous , Nairouz Mrabah , Mohamed Bouguessa

Drug discovery often relies on the successful prediction of protein-ligand binding affinity. Recent advances have shown great promise in applying graph neural networks (GNNs) for better affinity prediction by learning the representations of…

Quantitative Methods · Quantitative Biology 2021-07-24 Shuangli Li , Jingbo Zhou , Tong Xu , Liang Huang , Fan Wang , Haoyi Xiong , Weili Huang , Dejing Dou , Hui Xiong

Knowledge graph embeddings (KGE) have been validated as powerful methods for inferring missing links in knowledge graphs (KGs) that they typically map entities into Euclidean space and treat relations as transformations of entities.…

Machine Learning · Computer Science 2024-02-26 Wenjie Zheng , Wenxue Wang , Shu Zhao , Fulan Qian

Graph neural network (GNN) has shown superior performance in dealing with graphs, which has attracted considerable research attention recently. However, most of the existing GNN models are primarily designed for graphs in Euclidean spaces.…

Machine Learning · Computer Science 2019-12-09 Yiding Zhang , Xiao Wang , Xunqiang Jiang , Chuan Shi , Yanfang Ye

Unsupervised graph-level anomaly detection (UGAD) has garnered increasing attention in recent years due to its significance. Most existing methods that rely on traditional GNNs mainly consider pairwise relationships between first-order…

Machine Learning · Computer Science 2024-10-18 Yali Fu , Jindong Li , Jiahong Liu , Qianli Xing , Qi Wang , Irwin King

Graphical models have been popularly used for capturing conditional independence structure in multivariate data, which are often built upon independent and identically distributed observations, limiting their applicability to complex…

Methodology · Statistics 2025-07-03 Yuwen Wang , Changyu Liu , Xin He , Junhui Wang

Over the past few years, graph representation learning (GRL) has been a powerful strategy for analyzing graph-structured data. Recently, GRL methods have shown promising results by adopting self-supervised learning methods developed for…

Machine Learning · Computer Science 2022-09-05 Namkyeong Lee , Dongmin Hyun , Junseok Lee , Chanyoung Park

In heterogeneous graphs, we can observe complex structures such as tree-like or hierarchical structures. Recently, the hyperbolic space has been widely adopted in many studies to effectively learn these complex structures. Although these…

Machine Learning · Computer Science 2026-01-14 Jongmin Park , Seunghoon Han , Hyewon Lee , Won-Yong Shin , Sungsu Lim

Representing graphs as sets of node embeddings in certain curved Riemannian manifolds has recently gained momentum in machine learning due to their desirable geometric inductive biases, e.g., hierarchical structures benefit from hyperbolic…

Machine Learning · Computer Science 2020-06-09 Calin Cruceru , Gary Bécigneul , Octavian-Eugen Ganea

Exploiting internal spatial geometric constraints of sparse LiDARs is beneficial to depth completion, however, has been not explored well. This paper proposes an efficient method to learn geometry-aware embedding, which encodes the local…

Computer Vision and Pattern Recognition · Computer Science 2022-06-02 Wenchao Du , Hu Chen , Hongyu Yang , Yi Zhang

Graph learning (GL) can dynamically capture the distribution structure (graph structure) of data based on graph convolutional networks (GCN), and the learning quality of the graph structure directly influences GCN for semi-supervised…

Computer Vision and Pattern Recognition · Computer Science 2020-06-01 Guangfeng Lin , Xiaobing Kang , Kaiyang Liao , Fan Zhao , Yajun Chen

Many complex engineering systems can be represented in a topological form, such as graphs. This paper utilizes a machine learning technique called Geometric Deep Learning (GDL) to aid designers with challenging, graph-centric design…

Computational Engineering, Finance, and Science · Computer Science 2023-08-07 Anthony Sirico , Daniel R. Herber

The notion of local intrinsic dimensionality (LID) is an important advancement in data dimensionality analysis, with applications in data mining, machine learning and similarity search problems. Existing distance-based LID estimators were…

Machine Learning · Computer Science 2023-07-14 Miloš Savić , Vladimir Kurbalija , Miloš Radovanović

Knowledge graph (KG) embeddings learn low-dimensional representations of entities and relations to predict missing facts. KGs often exhibit hierarchical and logical patterns which must be preserved in the embedding space. For hierarchical…

Machine Learning · Computer Science 2020-05-05 Ines Chami , Adva Wolf , Da-Cheng Juan , Frederic Sala , Sujith Ravi , Christopher Ré

Neural embeddings have been used with great success in Natural Language Processing (NLP). They provide compact representations that encapsulate word similarity and attain state-of-the-art performance in a range of linguistic tasks. The…

Machine Learning · Statistics 2018-09-20 Benjamin Paul Chamberlain , James Clough , Marc Peter Deisenroth

Automatically detecting/segmenting object(s) that blend in with their surroundings is difficult for current models. A major challenge is that the intrinsic similarities between such foreground objects and background surroundings make the…

Computer Vision and Pattern Recognition · Computer Science 2021-04-07 Qiang Zhai , Xin Li , Fan Yang , Chenglizhao Chen , Hong Cheng , Deng-Ping Fan

In recent years, Hypergraph Neural Networks (HNNs) have demonstrated immense potential in handling complex systems with high-order interactions. However, acquiring large-scale, high-quality labeled data for these models is costly, making…

Machine Learning · Computer Science 2025-07-29 Yanheng Hou , Xunkai Li , Zhenjun Li , Bing Zhou , Ronghua Li , Guoren Wang

The history-dependent behaviors of classical plasticity models are often driven by internal variables evolved according to phenomenological laws. The difficulty to interpret how these internal variables represent a history of deformation,…

Machine Learning · Computer Science 2023-01-04 Nikolaos N. Vlassis , WaiChing Sun

Network embedding techniques aim at representing structural properties of graphs in geometric space. Those representations are considered useful in downstream tasks such as link prediction and clustering. However, the number of graph…

Physics and Society · Physics 2021-11-03 Yi-Jiao Zhang , Kai-Cheng Yang , Filippo Radicchi

In two previous papers, we exposed a combinatorial approach to the program of Geometry of Interaction, a program initiated by Jean-Yves Girard. The strength of our approach lies in the fact that we interpret proofs by simpler structures -…

Logic in Computer Science · Computer Science 2015-09-01 Thomas Seiller