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It is known that hyperedge replacement grammars are similar to string context-free grammars in the sense of definitions and properties. Therefore, we expect that there is a generalization of the well-known Greibach normal form from string…

Formal Languages and Automata Theory · Computer Science 2020-12-04 Tikhon Pshenitsyn

Discovering the underlying structures present in large real world graphs is a fundamental scientific problem. Recent work at the intersection of formal language theory and graph theory has found that a Hyperedge Replacement Grammar (HRG)…

Social and Information Networks · Computer Science 2017-06-30 Corey Pennycuff , Salvador Aguinaga , Tim Weninger

String diagrams provide an intuitive language for expressing networks of interacting processes graphically. A discrete representation of string diagrams, called string graphs, allows for mechanised equational reasoning by double-pushout…

Logic in Computer Science · Computer Science 2015-10-14 Aleks Kissinger , Vladimir Zamdzhiev

This paper explores the use of factor graphs as an inference and analysis tool for Bayesian peer-to-peer decentralized data fusion. We propose a framework by which agents can each use local factor graphs to represent relevant partitions of…

Robotics · Computer Science 2023-03-07 Ofer Dagan , Nisar R. Ahmed

We demonstrate that graph-based models are fully capable of representing higher-order interactions, and have a long history of being used for precisely this purpose. This stands in contrast to a common claim in the recent literature on…

Physics and Society · Physics 2026-02-20 Tiago P. Peixoto , Leto Peel , Thilo Gross , Manlio De Domenico

The two most popular types of graphical model are directed models (Bayesian networks) and undirected models (Markov random fields, or MRFs). Directed and undirected models offer complementary properties in model construction, expressing…

Artificial Intelligence · Computer Science 2012-12-12 Brendan J. Frey

Graph Generating Dependencies (GGDs) informally express constraints between two (possibly different) graph patterns which enforce relationships on both graph's data (via property value constraints) and its structure (via topological…

Databases · Computer Science 2022-11-02 Larissa C. Shimomura , Nikolay Yakovets , George Fletcher

Defeasible reasoning is the mode of reasoning where conclusions can be overturned by taking into account new evidence. A commonly used method in cognitive science and logic literature is to handcraft argumentation supporting inference…

Computation and Language · Computer Science 2021-06-01 Aman Madaan , Dheeraj Rajagopal , Niket Tandon , Yiming Yang , Eduard Hovy

In this article we generalize the theory of subgroup graphs of subgroups of free groups to finite index subgroups $H$ of finitely generated groups $G$. We study and prove various properties of $H$ in relation to its subgroup graph…

Group Theory · Mathematics 2016-03-23 Cora Welsch

Directed acyclic graphs (DAGs) are a class of graphs commonly used in practice, with examples that include electronic circuits, Bayesian networks, and neural architectures. While many effective encoders exist for DAGs, it remains…

Machine Learning · Computer Science 2025-05-30 Michael Sun , Orion Foo , Gang Liu , Wojciech Matusik , Jie Chen

Functional graphs (FGs) model the graph structures used to analyse the behaviour of functions from a discrete set to itself. In turn, such functions are used to study real complex phenomena evolving in time. As the systems involved can be…

Dynamical Systems · Mathematics 2024-04-05 François Doré , Enrico Formenti , Antonio E. Porreca , Sara Riva

General factors are a generalization of matchings. Given a graph $G$ with a set $\pi(v)$ of feasible degrees, called a degree constraint, for each vertex $v$ of $G$, the general factor problem is to find a (spanning) subgraph $F$ of $G$…

Discrete Mathematics · Computer Science 2024-05-24 Shuai Shao , Stanislav Živný

Graphs are important data representations for describing objects and their relationships, which appear in a wide diversity of real-world scenarios. As one of a critical problem in this area, graph generation considers learning the…

Machine Learning · Computer Science 2022-10-06 Xiaojie Guo , Liang Zhao

This note describes a new approach to classifying graphs that leverages graph generative models (GGM). Assuming a GGM that defines a joint probability distribution over graphs and their class labels, I derive classification formulas for the…

Machine Learning · Computer Science 2023-07-25 Oliver Schulte

A graph G on n vertices is said to be extendable if G can be modified to form a new graph H on more than n vertices, while preserving the degrees of the vertices common to G and H. The added vertices all have the same degree and we define…

Combinatorics · Mathematics 2018-03-09 Ghurumuruhan Ganesan

Process theories combine a graphical language for compositional reasoning with an underlying categorical semantics. They have been successfully applied to fields such as quantum computation, natural language processing, linear dynamical…

Logic in Computer Science · Computer Science 2018-05-17 Dan Marsden , Fabrizio Genovese

Probabilistic graphical models provide a powerful tool to describe complex statistical structure, with many real-world applications in science and engineering from controlling robotic arms to understanding neuronal computations. A major…

Artificial Intelligence · Computer Science 2023-05-04 Yicheng Fei , Xaq Pitkow

Graph data structures are fundamental for studying connected entities. With an increase in the number of applications where data is represented as graphs, the problem of graph generation has recently become a hot topic. However, despite its…

We present in this article the model Function-described graph (FDG), which is a type of compact representation of a set of attributed graphs (AGs) that borrow from Random Graphs the capability of probabilistic modelling of structural and…

Artificial Intelligence · Computer Science 2016-05-11 Francesc Serratosa

Large graphs are present in a variety of domains, including social networks, civil infrastructure, and the physical sciences to name a few. Graph generation is similarly widespread, with applications in drug discovery, network analysis and…

Machine Learning · Computer Science 2023-11-08 Alex O. Davies , Nirav S. Ajmeri , Telmo M. Silva Filho