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One major challenge of neuroscience is finding interesting structures in a seemingly disorganized neural activity. Often these structures have computational implications that help to understand the functional role of a particular brain…

Neurons and Cognition · Quantitative Biology 2023-09-01 Srdjan Ostojic , Stefano Fusi

Machine learning problems have an intrinsic geometric structure as central objects including a neural network's weight space and the loss function associated with a particular task can be viewed as encoding the intrinsic geometry of a given…

Machine Learning · Computer Science 2021-06-08 Guruprasad Raghavan , Matt Thomson

In this paper, a geometric framework for neural networks is proposed. This framework uses the inner product space structure underlying the parameter set to perform gradient descent not in a component-based form, but in a coordinate-free…

Machine Learning · Statistics 2016-10-06 Anthony L. Caterini , Dong Eui Chang

In this paper, we investigate the geometric structure of activation spaces of fully connected layers in neural networks and then show applications of this study. We propose an efficient approximation algorithm to characterize the convex…

Machine Learning · Computer Science 2019-04-03 Yuting Jia , Haiwen Wang , Shuo Shao , Huan Long , Yunsong Zhou , Xinbing Wang

Effective analysis in neuroscience benefits significantly from robust conceptual frameworks. Traditional metrics of interbrain synchrony in social neuroscience typically depend on fixed, correlation-based approaches, restricting their…

Neurons and Cognition · Quantitative Biology 2025-12-01 Nicolás Hinrichs , Noah Guzmán , Melanie Weber

Using a perturbative expansion for weak synaptic weights and weak sources of randomness, we calculate the correlation structure of neural networks with generic connectivity matrices. In detail, the perturbative parameters are the mean and…

Neurons and Cognition · Quantitative Biology 2013-07-11 D. Fasoli , O. Faugeras

Deep learning models are often considered black boxes due to their complex hierarchical transformations. Identifying suitable architectures is crucial for maximizing predictive performance with limited data. Understanding the geometric…

Machine Learning · Computer Science 2025-03-11 Michael Wienczkowski , Addisu Desta , Paschal Ugochukwu

We present a framework for simulating signal propagation in geometric networks (i.e. networks that can be mapped to geometric graphs in some space) and for developing algorithms that estimate (i.e. map) the state and functional topology of…

Disordered Systems and Neural Networks · Physics 2010-06-23 Marius Buibas , Gabriel A. Silva

Geometric graphs are a special kind of graph with geometric features, which are vital to model many scientific problems. Unlike generic graphs, geometric graphs often exhibit physical symmetries of translations, rotations, and reflections,…

Recurrent neural networks have been extensively studied in the context of neuroscience and machine learning due to their ability to implement complex computations. While substantial progress in designing effective learning algorithms has…

Neurons and Cognition · Quantitative Biology 2019-01-21 Francesca Mastrogiuseppe , Srdjan Ostojic

In neural networks with identical neurons, the matrix of connection weights completely describes the network structure and thereby determines how it is processing information. However, due to the non-linearity of these systems, it is not…

Neurons and Cognition · Quantitative Biology 2018-11-14 Patrick Krauss , Alexandra Zankl , Achim Schilling , Holger Schulze , Claus Metzner

A growing body of research indicates that structural plasticity mechanisms are crucial for learning and memory consolidation. Starting from a simple phenomenological model, we exploit a mean-field approach to develop a theoretical framework…

Neurons and Cognition · Quantitative Biology 2024-06-19 Gianmarco Tiddia , Luca Sergi , Bruno Golosio

Partial synchronization plays a crucial role in the functioning of neuronal networks: selective, coordinated activation of neurons enables information processing that flexibly adapts to a changing computational context. Since the structure…

Neurons and Cognition · Quantitative Biology 2025-06-17 Daniil Radushev , Olesia Dogonasheva , Boris Gutkin , Denis Zakharov

Using a generalized random recurrent neural network model, and by extending our recently developed mean-field approach [J. Aljadeff, M. Stern, T. Sharpee, Phys. Rev. Lett. 114, 088101 (2015)], we study the relationship between the network…

Disordered Systems and Neural Networks · Physics 2016-02-09 Johnatan Aljadeff , David Renfrew , Marina Vegué , Tatyana O. Sharpee

This paper describes how realistic neuromorphic networks can have their connectivity fully characterized in analytical fashion. By assuming that all neurons have the same shape and are regularly distributed along the two-dimensional…

Disordered Systems and Neural Networks · Physics 2007-05-23 Luciano da Fontoura Costa , Marconi Soares Barbosa

The geometry of weight spaces and functional manifolds of neural networks play an important role towards 'understanding' the intricacies of ML. In this paper, we attempt to solve certain open questions in ML, by viewing them through the…

Machine Learning · Computer Science 2020-12-18 Guruprasad Raghavan , Matt Thomson

Mathematical modeling has broad applications in neuroscience whether modeling the dynamics of a single synapse or an entire network of neurons. In Part I, we model vesicle replenishment and release at the photoreceptor synapse to better…

Neurons and Cognition · Quantitative Biology 2017-02-23 Caitlyn M. Parmelee

The correlation matrix is a central representation of functional brain networks in neuroimaging. Traditional analyses often treat pairwise interactions independently in a Euclidean setting, overlooking the intrinsic geometry of correlation…

Machine Learning · Statistics 2025-04-10 Kisung You , Yelim Lee , Hae-Jeong Park

Advances in experimental neuroscience have transformed our ability to explore the structure and function of neural circuits. At the same time, advances in machine learning have unleashed the remarkable computational power of artificial…

Neurons and Cognition · Quantitative Biology 2021-11-23 SueYeon Chung , L. F. Abbott

Biological neural networks have evolved to maintain performance despite significant circuit damage. To survive damage, biological network architectures have both intrinsic resilience to component loss and also activate recovery programs…

Neural and Evolutionary Computing · Computer Science 2020-06-04 Guruprasad Raghavan , Jiayi Li , Matt Thomson
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