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Genetic information and environmental factors determine the path of an individuals life and therefore, the evolution of its entire species. We have succeeded in proposing and studying a model that captures this idea. In our model, a…

Populations and Evolution · Quantitative Biology 2021-07-28 N. Abadi , G. Abramson

Biology stores information and computes at the molecular scale, yet the ways in which it does so are often distinct from human-engineered computers. Mapping biological computation onto architectures familiar to computer science remains an…

Biological Physics · Physics 2026-03-31 Jan Kocka , Kabir Husain , Jaime Agudo-Canalejo

Explaining the origin of life requires us to explain how self-replication arises. To be specific, how can a self-replicating entity develop spontaneously from a chemical reaction system in which no reaction is self-replicating? Previously…

Adaptation and Self-Organizing Systems · Physics 2020-12-18 Yu Liu , David Sumpter

Regardless of the marked differences between biological and artificial neural systems, one fundamental similarity is that they are essentially dynamical systems that can learn to imitate other dynamical systems, without knowing their…

Neurons and Cognition · Quantitative Biology 2019-11-06 Zhixin Lu , Danielle S. Bassett

The idea that the brain is a probabilistic (Bayesian) inference machine, continuously trying to figure out the hidden causes of its inputs, has become very influential in cognitive (neuro)science over recent decades. Here I present a…

Neurons and Cognition · Quantitative Biology 2024-02-15 Eelke Spaak

Computational complexity is examined using the principle of increasing entropy. To consider computation as a physical process from an initial instance to the final acceptance is motivated because many natural processes have been recognized…

Computational Complexity · Computer Science 2012-03-20 Arto Annila

We consider the problem of automatically proving resource bounds. That is, we study how to prove that an integer-valued resource variable is bounded by a given program expression. Automatic resource-bound analysis has recently received…

Programming Languages · Computer Science 2021-10-15 Tianhan Lu , Bor-Yuh Evan Chang , Ashutosh Trivedi

Following extensive numerical experiments, it has been suggested that the evolution of competing computer programs in artificial life simulations shows signs of being a self-organized critical process. The primary evidence for this claim…

adap-org · Physics 2009-10-30 M. E. J. Newman , Simon M. Fraser , Kim Sneppen , William A. Tozier

The Machine Consciousness Hypothesis states that consciousness is a substrate-free functional property of computational systems capable of second-order perception. I propose a research program to investigate this idea in silico by studying…

Artificial Intelligence · Computer Science 2025-12-02 Stephen Fitz

As inductive inference and machine learning methods in computer science see continued success, researchers are aiming to describe ever more complex probabilistic models and inference algorithms. It is natural to ask whether there is a…

Logic · Mathematics 2019-11-19 Nathanael L. Ackerman , Cameron E. Freer , Daniel M. Roy

The origin of life can be understood mathematically to be the origin of information that can replicate. The likelihood that entropy spontaneously becomes information can be calculated from first principles, and depends exponentially on the…

Populations and Evolution · Quantitative Biology 2017-01-09 Christoph Adami , Thomas LaBar

We introduce a set of eight universal Rules of Inference by which computer programs with known properties (axioms) are transformed into new programs with known properties (theorems). Axioms are presented to formalize a segment of Number…

Logic in Computer Science · Computer Science 2007-05-23 Charlie Volkstorf

The emergence of life from inanimate matter presents a thermodynamic challenge: the Second Law of Thermodynamics dictates a global trend towards disorder, yet life constitutes localized pockets of profound organization. This paper presents…

Statistical Mechanics · Physics 2026-03-17 Shlomo Segal

There are enormous amount of examples of Computation in nature, exemplified across multiple species in biology. One crucial aim for these computations across all life forms their ability to learn and thereby increase the chance of their…

Machine Learning · Computer Science 2013-12-30 Nabarun Mondal , Partha P. Ghosh

Creating autonomous, self-supporting, self-replicating, sustainable systems is a great challenge. To some extent, understanding life means not only being able to create it from scratch, but also improving, supporting, saving it, or even…

Robotics · Computer Science 2011-11-07 Serge Kernbach

Limitation of computational resources is considered as a universal principle that for simulation is as fundamental as physical laws are. It claims that all experimentally verifiable implications of physical laws can be simulated by the…

Quantum Physics · Physics 2007-05-23 Yuri I. Ozhigov

Replay in neural networks involves training on sequential data with memorized samples, which counteracts forgetting of previous behavior caused by non-stationarity. We present a method where these auxiliary samples are generated on the fly,…

Machine Learning · Computer Science 2020-12-15 Xu Ji , Joao Henriques , Tinne Tuytelaars , Andrea Vedaldi

Unlike computation or the numerical analysis of differential equations, simulation does not have a well established conceptual and mathematical foundation. Simulation is an arguable unique union of modeling and computation. However,…

adap-org · Physics 2008-02-03 Steen Rasmussen , Christopher Barrett

Environmental fluctuations can shape replicator dynamics, with important consequences for both prebiotic and modern ecosystems. However, it remains unclear how simple replicators can acquire and use information about fluctuating…

Biological Physics · Physics 2026-05-25 Jordi Piñero , Damian R. Sowinski , Gourab Ghoshal , Adam Frank , Artemy Kolchinsky

Biological neural networks can perform complex computations to predict their environment, far above the limited predictive capabilities of individual neurons. While conventional approaches to understanding these computations often focus on…

Neurons and Cognition · Quantitative Biology 2024-06-28 Hanna M. Tolle , Andrea I Luppi , Anil K. Seth , Pedro A. M. Mediano
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