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An intelligent machine that can answer human questions based on electronic health records (EHR-QA) has a great practical value, such as supporting clinical decisions, managing hospital administration, and medical chatbots. Previous…

Computation and Language · Computer Science 2021-11-30 Seongsu Bae , Daeyoung Kim , Jiho Kim , Edward Choi

Question Answering (QA) systems on patient-related data can assist both clinicians and patients. They can, for example, assist clinicians in decision-making and enable patients to have a better understanding of their medical history.…

Machine Learning · Computer Science 2023-11-09 Jayetri Bardhan , Kirk Roberts , Daisy Zhe Wang

Question Answering on Electronic Health Records (EHR-QA) has a significant impact on the healthcare domain, and it is being actively studied. Previous research on structured EHR-QA focuses on converting natural language queries into query…

Computation and Language · Computer Science 2022-04-18 Daeyoung Kim , Seongsu Bae , Seungho Kim , Edward Choi

Knowledge Graph Question Answering (KGQA) systems are based on machine learning algorithms, requiring thousands of question-answer pairs as training examples or natural language processing pipelines that need module fine-tuning. In this…

Artificial Intelligence · Computer Science 2022-02-03 Daniel Vollmers , Rricha Jalota , Diego Moussallem , Hardik Topiwala , Axel-Cyrille Ngonga Ngomo , Ricardo Usbeck

This paper develops the first question answering dataset (DrugEHRQA) containing question-answer pairs from both structured tables and unstructured notes from a publicly available Electronic Health Record (EHR). EHRs contain patient records,…

Artificial Intelligence · Computer Science 2022-05-04 Jayetri Bardhan , Anthony Colas , Kirk Roberts , Daisy Zhe Wang

Knowledge Graph Question Answering (KGQA) simplifies querying vast amounts of knowledge stored in a graph-based model using natural language. However, the research has largely concentrated on English, putting non-English speakers at a…

Computation and Language · Computer Science 2024-07-09 Nikit Srivastava , Mengshi Ma , Daniel Vollmers , Hamada Zahera , Diego Moussallem , Axel-Cyrille Ngonga Ngomo

Electronic Health Records (EHRs), which contain patients' medical histories in various multi-modal formats, often overlook the potential for joint reasoning across imaging and table modalities underexplored in current EHR Question Answering…

Computation and Language · Computer Science 2023-12-27 Seongsu Bae , Daeun Kyung , Jaehee Ryu , Eunbyeol Cho , Gyubok Lee , Sunjun Kweon , Jungwoo Oh , Lei Ji , Eric I-Chao Chang , Tackeun Kim , Edward Choi

Large language models (LLMs) have shown promise in table Question Answering (Table QA). However, extending these capabilities to multi-table QA remains challenging due to unreliable schema linking across complex tables. Existing methods…

Artificial Intelligence · Computer Science 2025-11-25 Xixi Wang , Miguel Costa , Jordanka Kovaceva , Shuai Wang , Francisco C. Pereira

Electronic Health Records (EHRs) are relational databases that store the entire medical histories of patients within hospitals. They record numerous aspects of patients' medical care, from hospital admission and diagnosis to treatment and…

Computation and Language · Computer Science 2024-05-24 Gyubok Lee , Sunjun Kweon , Seongsu Bae , Edward Choi

Accessing knowledge via multilingual natural-language interfaces is one of the emerging challenges in the field of information retrieval and related ones. Structured knowledge stored in knowledge graphs can be queried via a specific query…

Computation and Language · Computer Science 2025-07-24 Aleksandr Perevalov , Andreas Both

We present a new text-to-SQL dataset for electronic health records (EHRs). The utterances were collected from 222 hospital staff members, including physicians, nurses, and insurance review and health records teams. To construct the QA…

Computation and Language · Computer Science 2026-03-06 Gyubok Lee , Hyeonji Hwang , Seongsu Bae , Yeonsu Kwon , Woncheol Shin , Seongjun Yang , Minjoon Seo , Jong-Yeup Kim , Edward Choi

Knowledge from diverse application domains is organized as knowledge graphs (KGs) that are stored in RDF engines accessible in the web via SPARQL endpoints. Expressing a well-formed SPARQL query requires information about the graph…

Artificial Intelligence · Computer Science 2023-08-10 Reham Omar , Ishika Dhall , Panos Kalnis , Essam Mansour

Question Answering (QA) is a task that entails reasoning over natural language contexts, and many relevant works augment language models (LMs) with graph neural networks (GNNs) to encode the Knowledge Graph (KG) information. However, most…

Computation and Language · Computer Science 2023-04-26 Jinyoung Park , Hyeong Kyu Choi , Juyeon Ko , Hyeonjin Park , Ji-Hoon Kim , Jisu Jeong , Kyungmin Kim , Hyunwoo J. Kim

The intelligent question answering (IQA) system can accurately capture users' search intention by understanding the natural language questions, searching relevant content efficiently from a massive knowledge-base, and returning the answer…

Artificial Intelligence · Computer Science 2021-06-17 Yachen Tang , Haiyun Han , Xianmao Yu , Jing Zhao , Guangyi Liu , Longfei Wei

Multi-hop Knowledge Base Question Answering(KBQA) aims to find the answer entity in a knowledge graph (KG), which requires multiple steps of reasoning. Existing retrieval-based approaches solve this task by concentrating on the specific…

Computation and Language · Computer Science 2023-12-20 Haowei Du , Quzhe Huang , Chen Li , Chen Zhang , Yang Li , Dongyan Zhao

Question answering (QA) in the field of healthcare has received much attention due to significant advancements in natural language processing. However, existing healthcare QA datasets primarily focus on medical images, clinical notes, or…

Quantitative Methods · Quantitative Biology 2023-10-12 Jungwoo Oh , Gyubok Lee , Seongsu Bae , Joon-myoung Kwon , Edward Choi

Background. In the last decades, several life science resources have structured data using the same framework and made these accessible using the same query language to facilitate interoperability. Knowledge graphs have seen increased…

Medical visual question answering (VQA) aims to answer clinically relevant questions regarding input medical images. This technique has the potential to improve the efficiency of medical professionals while relieving the burden on the…

Computer Vision and Pattern Recognition · Computer Science 2023-02-21 Xinyue Hu , Lin Gu , Kazuma Kobayashi , Qiyuan An , Qingyu Chen , Zhiyong Lu , Chang Su , Tatsuya Harada , Yingying Zhu

The goal of Question Answering over Knowledge Graphs (KGQA) is to find answers for natural language questions over a knowledge graph. Recent KGQA approaches adopt a neural machine translation (NMT) approach, where the natural language…

Artificial Intelligence · Computer Science 2021-07-08 Daniel Diomedi , Aidan Hogan

Increasingly large electronic health records (EHRs) provide an opportunity to algorithmically learn medical knowledge. In one prominent example, a causal health knowledge graph could learn relationships between diseases and symptoms and…

Applications · Statistics 2019-10-04 Irene Y. Chen , Monica Agrawal , Steven Horng , David Sontag
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