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The persistence diagram of Cohen-Steiner, Edelsbrunner, and Harer was recently generalized by Patel to the case of constructible persistence modules with values in a symmetric monoidal category with images. Patel also introduced a distance…

Algebraic Topology · Mathematics 2017-10-05 Ville Puuska

The stability method is very useful for obtaining exact solutions of many extremal graph problems. Its key step is to establish the stability property which, roughly speaking, states that any two almost optimal graphs of the same order $n$…

Combinatorics · Mathematics 2010-07-30 Oleg Pikhurko

In real-world systems, the relationships and connections between components are highly complex. Real systems are often described as networks, where nodes represent objects in the system and edges represent relationships or connections…

Algebraic Topology · Mathematics 2024-06-24 Shen Zhang

The computational cost of persistent homology is often dominated by the growth of the underlying simplicial filtrations. Many different filtrations exist, each with its own assumptions and trade-offs, but all face some form of this growth…

Algebraic Topology · Mathematics 2026-05-15 António Leitão

Topological Data Analysis (TDA) is an approach to handle with big data by studying its shape. A main tool of TDA is the persistence diagram, and one can use it to compare data sets. One approach to learn on the similarity between two…

Applications · Statistics 2020-03-04 Sarit Agami

Determining whether two graphs are isomorphic is a fundamental problem with practical applications in areas such as molecular chemistry or social network analysis, yet it remains a challenging task, with exact solutions often being…

Motivated by questions about simplification of topology, we take a discrete approach to the dependency of simplifying operations, using methods based on combinatorial gradient dynamics. We interpret the filter in persistent homology as a…

Algebraic Topology · Mathematics 2026-05-26 Herbert Edelsbrunner , Michał Lipiński , Marian Mrozek , Manuel Soriano-Trigueros

In this paper we consider finite dimensional dynamical systems generated by a Lipschitz function. We prove a version of the Whitney's Extension Theorem on compact manifolds to obtain a version of the well-known Lambda Lemma for Lipschitz…

Analysis of PDEs · Mathematics 2021-09-16 Leonardo Pires , Giuliano G. La Guardia

Persistence diagrams (PDs), often characterized as sets of death and birth of homology class, have been known for providing a topological representation of a graph structure, which is often useful in machine learning tasks. Prior works rely…

Machine Learning · Computer Science 2022-09-29 Chau Pham , Trung Dang , Peter Chin

We present a machine learning approach that leverages persistent homology to classify bacterial flagellar motors into two functional states: rotated and stalled. By embedding protein structural data into a topological framework, we extract…

Biomolecules · Quantitative Biology 2025-12-19 Zakaria Lamine , Abdelatif Hafid , Mohamed Rahouti

The exact computation of the matching distance for multi-parameter persistence modules is an active area of research in computational topology. Achieving an easily obtainable exact computation of this distance would permit multi-parameter…

Algebraic Topology · Mathematics 2025-10-22 Asilata Bapat , Robyn Brooks , Celia Hacker , Claudia Landi , Barbara I. Mahler , Elizabeth R. Stephenson

Reeb graphs are a fundamental structure for analyzing the topological and geometric properties of scalar fields. Comparing Reeb graphs is crucial for advancing research in this domain, yet existing metrics are often computationally…

Computational Geometry · Computer Science 2025-07-03 Erin W. Chambers , Guangyu Meng

Topological features based on persistent homology capture high-order structural information so as to augment graph neural network methods. However, computing extended persistent homology summaries remains slow for large and dense graphs and…

Machine Learning · Computer Science 2022-11-16 Zuoyu Yan , Tengfei Ma , Liangcai Gao , Zhi Tang , Yusu Wang , Chao Chen

We introduce a new metric homology theory, Moderately Discontinuous Homology, which captures Lipschitz properties of metric subanalytic germs. The main novelty is to allow "moderately discontinuous" chains, which are specially advantageous…

Algebraic Geometry · Mathematics 2020-01-23 Javier Fernandez de Bobadilla , Sonja Heinze , Maria Pe Pereira , Jose Edson Sampaio

Persistent homology analysis provides means to capture the connectivity structure of data sets in various dimensions. On the mathematical level, by defining a metric between the objects that persistence attaches to data sets, we can…

Machine Learning · Computer Science 2019-06-12 Henri Riihimäki , José Licón-Saláiz

Link prediction is an important learning task for graph-structured data. In this paper, we propose a novel topological approach to characterize interactions between two nodes. Our topological feature, based on the extended persistent…

Machine Learning · Computer Science 2021-06-15 Zuoyu Yan , Tengfei Ma , Liangcai Gao , Zhi Tang , Chao Chen

Two flows on a finite-dimensional normed space $X$ are Lipschitz equivalent if some homeomorphism $h$ of $X$ that is bi-Lipschitz near the origin preserves all orbits, i.e., $h$ maps each orbit onto an orbit. A complete classification by…

Dynamical Systems · Mathematics 2026-02-17 Arno Berger , Anthony Wynne

A discrete group which admits a faithful, finite dimensional, linear representation over a field $\mathbb F$ of characteristic zero is called linear. This note combines the natural structure of semi-direct products with work of A. Lubotzky…

Group Theory · Mathematics 2007-10-19 F. R. Cohen , Marston Conder , J. Lopez , Stratos Prassidis

We define persistent homology groups over any set of spaces which have inclusions defined so that the corresponding directed graph between the spaces is acyclic, as well as along any subgraph of this directed graph. This method…

Computational Geometry · Computer Science 2019-06-20 Erin Wolf Chambers , David Letscher

Multiparameter persistence modules come up naturally in topological data analysis and topological robotics. Given a metric graph $(X,\delta)$, the second configuration space of $(X,\delta)$ with proximity parameters (for example, the…

Algebraic Topology · Mathematics 2023-10-10 Wenwen Li