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Since Lorenz's seminal work on a simplified weather model, the numerical analysis of nonlinear dynamical systems has become one of the main subjects of research in physics. Despite of that, there remains a need for accessible, efficient,…

This paper provides the description of a novel, multi-purpose spline library. In accordance with the increasingly diverse modes of usage of splines, it is multi-purpose in the sense that it supports geometry representation, finite element…

Mathematical Software · Computer Science 2020-02-28 Markus Frings , Norbert Hosters , Corinna Müller , Max Spahn , Christoph Susen , Konstantin Key , Stefanie Elgeti

We present a framework for efficiently performing Monte Carlo wave-function simulations in cavity QED with moving particles. It relies heavily on the object-oriented programming paradigm as realised in C++, and is extensible and applicable…

Quantum Physics · Physics 2009-11-13 A. Vukics , H. Ritsch

We describe an algorithm and a C++ implementation that we have written and made available for calculating the fully nonlinear evolution of 5D braneworld models with scalar fields. Bulk fields allow for the stabilization of the extra space.…

High Energy Physics - Phenomenology · Physics 2009-11-10 Johannes Martin , Gary N. Felder , Andrei V. Frolov , Lev Kofman , Marco Peloso

Object-oriented programming has been considered a most promising method in program development and maintenance. An important feature of object-oriented programs (OOPs) is their reusability which can be achieved through the inheritance of…

Programming Languages · Computer Science 2010-06-15 Santosh Kumar Pani , Priya Arundhati

BayesOpt is a library with state-of-the-art Bayesian optimization methods to solve nonlinear optimization, stochastic bandits or sequential experimental design problems. Bayesian optimization is sample efficient by building a posterior…

Machine Learning · Computer Science 2014-05-30 Ruben Martinez-Cantin

Dynamic evaluation is a paradigm in computer algebra which was introduced for computing with algebraic numbers. In linear algebra, for instance, dynamic evaluation can be used to apply programs which have been written for matrices with…

Logic in Computer Science · Computer Science 2014-11-27 Jean-Guillaume Dumas , Dominique Duval , Burak Ekici , Damien Pous

As computational challenges in optimization and statistical inference grow ever harder, algorithms that utilize derivatives are becoming increasingly more important. The implementation of the derivatives that make these algorithms so…

Mathematical Software · Computer Science 2015-09-25 Bob Carpenter , Matthew D. Hoffman , Marcus Brubaker , Daniel Lee , Peter Li , Michael Betancourt

The possibility of interaction between Maple and numeric compiled languages in performing extensive numeric calculations is exemplified by the Ndynamics package, a tool for studying the (chaotic) behavior of dynamical systems. Programming…

Numerical Analysis · Mathematics 2025-10-20 E. V. Correa Silva , L. G. S. Duarte , L. A. C. P. da Mota , J. E. F. Skea

The rapid evolution of Cyber-Physical Systems (CPS) across various domains like mobility systems, networked control systems, sustainable manufacturing, smart power grids, and the Internet of Things necessitates innovative solutions that…

Optimization and Control · Mathematics 2024-06-25 Andreas A. Malikopoulos

End-to-end learning of dynamical systems with black-box models, such as neural ordinary differential equations (ODEs), provides a flexible framework for learning dynamics from data without prescribing a mathematical model for the dynamics.…

Machine Learning · Statistics 2022-06-20 Paidamoyo Chapfuwa , Sherri Rose , Lawrence Carin , Edward Meeds , Ricardo Henao

In this paper we introduce diagNNose, an open source library for analysing the activations of deep neural networks. diagNNose contains a wide array of interpretability techniques that provide fundamental insights into the inner workings of…

Computation and Language · Computer Science 2020-11-16 Jaap Jumelet

This paper studies the expressive and computational power of discrete Ordinary Differential Equations (ODEs), a.k.a. (Ordinary) Difference Equations. It presents a new framework using these equations as a central tool for computation and…

Logic in Computer Science · Computer Science 2022-09-27 Olivier Bournez , Arnaud Durand

The study of complex many-body systems via analysis of the trajectories of the units that dynamically move and interact within them is a non-trivial task. The workflow for extracting meaningful information from the raw trajectory data is…

Materials Science · Physics 2025-10-31 Simone Martino , Matteo Becchi , Andrew Tarzia , Daniele Rapetti , Giovanni M. Pavan

We present a method of discrete modeling and analysis of multilevel dynamics of complex large-scale hierarchical dynamic systems subject to external dynamic control mechanism. Architectural model of information system supporting simulation…

Computational Engineering, Finance, and Science · Computer Science 2008-09-23 Armen Bagdasaryan

Medusa, a novel library for implementation of strong form mesh-free methods, is described. We identify and present common parts and patterns among many such methods reported in the literature, such as node positioning, stencil selection and…

Mathematical Software · Computer Science 2021-07-07 Jure Slak , Gregor Kosec

Conan is a C++ library created for the accurate and efficient modelling, inference and analysis of complex networks. It implements the generation and modification of graphs according to several published models, as well as the unexpensive…

Quantitative Methods · Quantitative Biology 2010-12-02 Ricardo Honorato-Zimmer , Bryan Reynaert , Ignacio Vergara , Tomas Perez-Acle

The rotation of Hyperion is often modelled by equations of motion of an ellipsoidal satellite. The model is expected to be chaotic for large range of parameters. The paper contains a rigorous computer-assisted proof of the existence of…

Dynamical Systems · Mathematics 2019-07-10 Anna Gierzkiewicz , Piotr Zgliczyński

We describe BayesMix, a C++ library for MCMC posterior simulation for general Bayesian mixture models. The goal of BayesMix is to provide a self-contained ecosystem to perform inference for mixture models to computer scientists,…

Computation · Statistics 2022-05-18 Mario Beraha , Bruno Guindani , Matteo Gianella , Alessandra Guglielmi

In this paper, we introduce our open source implementation of the Coupled Discrete Unified Gas Kinetic Scheme (CDUGKS) of https://journals.aps.org/pre/abstract/10.1103/PhysRevE.98.053310, a phase space scheme capable of handling a wide…

Instrumentation and Methods for Astrophysics · Physics 2023-04-25 Alvaro Zamora , Elliott Slaughter , Tom Abel