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We present a method for finding hierarchy-aware embeddings of knowledge graphs (KGs) using graph neural networks (GNNs) enriched with a semantic loss derived from underlying ontologies. This method yields embeddings that better reflect…

Machine Learning · Computer Science 2026-05-21 Filip Kronström , Alexander H. Gower , Daniel Brunnsåker , Ievgeniia A. Tiukova , Ross D. King

Recent approaches of computer vision utilize deep learning methods as they perform quite well if training and testing domains follow the same underlying data distribution. However, it has been shown that minor variations in the images that…

Computer Vision and Pattern Recognition · Computer Science 2022-01-31 Sebastian Monka , Lavdim Halilaj , Achim Rettinger

The primary aim of Knowledge Graph embeddings (KGE) is to learn low-dimensional representations of entities and relations for predicting missing facts. While rotation-based methods like RotatE and QuatE perform well in KGE, they face two…

Computation and Language · Computer Science 2024-10-03 Yihua Zhu , Hidetoshi Shimodaira

Representation learning on a knowledge graph (KG) is to embed entities and relations of a KG into low-dimensional continuous vector spaces. Early KG embedding methods only pay attention to structured information encoded in triples, which…

Computation and Language · Computer Science 2020-01-01 Guanglin Niu , Yongfei Zhang , Bo Li , Peng Cui , Si Liu , Jingyang Li , Xiaowei Zhang

Knowledge graph embeddings (KGE) have been extensively studied to embed large-scale relational data for many real-world applications. Existing methods have long ignored the fact many KGs contain two fundamentally different views: high-level…

Artificial Intelligence · Computer Science 2023-07-06 Zijie Huang , Daheng Wang , Binxuan Huang , Chenwei Zhang , Jingbo Shang , Yan Liang , Zhengyang Wang , Xian Li , Christos Faloutsos , Yizhou Sun , Wei Wang

Knowledge graph embedding (KGE) is a technique that enhances knowledge graphs by addressing incompleteness and improving knowledge retrieval. A limitation of the existing KGE models is their underutilization of ontologies, specifically the…

Social and Information Networks · Computer Science 2025-04-07 Takanori Ugai

A key to knowledge graph embedding (KGE) is to choose a proper representation space, e.g., point-wise Euclidean space and complex vector space. In this paper, we propose a unified perspective of embedding and introduce uncertainty into KGE…

Machine Learning · Computer Science 2024-10-01 Changyi Xiao , Xiangnan He , Yixin Cao

Knowledge graph embedding (KGE) models represent each entity and relation of a knowledge graph (KG) with low-dimensional embedding vectors. These methods have recently been applied to KG link prediction and question answering over…

Computation and Language · Computer Science 2022-03-22 Apoorv Saxena , Adrian Kochsiek , Rainer Gemulla

Knowledge graph embedding (KGE), aiming to embed entities and relations into low-dimensional vectors, has attracted wide attention recently. However, the existing research is mainly based on the black-box neural models, which makes it…

Computation and Language · Computer Science 2020-11-13 Xiaoyu Kou , Yankai Lin , Yuntao Li , Jiahao Xu , Peng Li , Jie Zhou , Yan Zhang

Learning knowledge graph (KG) embeddings is an emerging technique for a variety of downstream tasks such as summarization, link prediction, information retrieval, and question answering. However, most existing KG embedding models neglect…

Databases · Computer Science 2020-04-30 Gengchen Mai , Krzysztof Janowicz , Ling Cai , Rui Zhu , Blake Regalia , Bo Yan , Meilin Shi , Ni Lao

Knowledge graphs (KGs), structured as multi-relational data of entities and relations, are vital for tasks like data analysis and recommendation systems. Knowledge graph completion (KGC), or link prediction, addresses incompleteness of KGs…

Machine Learning · Computer Science 2025-06-16 Huiling Zhu , Yingqi Zeng

Knowledge graph embeddings (KGEs) were originally developed to infer true but missing facts in incomplete knowledge repositories. In this paper, we link knowledge graph completion and counterfactual reasoning via our new task CFKGR. We…

Machine Learning · Computer Science 2024-03-12 Lena Zellinger , Andreas Stephan , Benjamin Roth

Recently, neural network based methods have shown their power in learning more expressive features on the task of knowledge graph embedding (KGE). However, the performance of deep methods often falls behind the shallow ones on simple…

Computation and Language · Computer Science 2022-11-10 Zhu Danhao , Shen Si , Huang Shujian , Yin Chang , Ding Ziqi

Knowledge graphs (KGs) consisting of triples are always incomplete, so it's important to do Knowledge Graph Completion (KGC) by predicting missing triples. Multi-Source KG is a common situation in real KG applications which can be viewed as…

Computation and Language · Computer Science 2020-10-27 Mingyang Chen , Wen Zhang , Zonggang Yuan , Yantao Jia , Huajun Chen

In recent years, we have witnessed the proliferation of knowledge graphs (KG) in various domains, aiming to support applications like question answering, recommendations, etc. A frequent task when integrating knowledge from different KGs is…

Databases · Computer Science 2023-06-08 Nikolaos Fanourakis , Vasilis Efthymiou , Dimitris Kotzinos , Vassilis Christophides

Knowledge graph embeddings (KGE) apply machine learning methods on knowledge graphs (KGs) to provide non-classical reasoning capabilities based on similarities and analogies. The learned KG embeddings are typically used to answer queries by…

Artificial Intelligence · Computer Science 2025-01-28 Yuqicheng Zhu , Nico Potyka , Jiarong Pan , Bo Xiong , Yunjie He , Evgeny Kharlamov , Steffen Staab

We introduce the framework of continuous--depth graph neural networks (GNNs). Graph neural ordinary differential equations (GDEs) are formalized as the counterpart to GNNs where the input-output relationship is determined by a continuum of…

Machine Learning · Computer Science 2021-06-23 Michael Poli , Stefano Massaroli , Junyoung Park , Atsushi Yamashita , Hajime Asama , Jinkyoo Park

Knowledge graph (KG) embedding seeks to learn vector representations for entities and relations. Conventional models reason over graph structures, but they suffer from the issues of graph incompleteness and long-tail entities. Recent…

Computation and Language · Computer Science 2022-09-16 Yang Liu , Zequn Sun , Guangyao Li , Wei Hu

Knowledge graph embedding (KGE) relies on the geometry of the embedding space to encode semantic and structural relations. Existing methods place all entities on one homogeneous manifold, Euclidean, spherical, hyperbolic, or their…

Machine Learning · Computer Science 2025-12-11 Zhengquan Luo , Guy Tadmor , Or Amar , David Zeevi , Zhiqiang Xu

Adoption of recently developed methods from machine learning has given rise to creation of drug-discovery knowledge graphs (KG) that utilize the interconnected nature of the domain. Graph-based modelling of the data, combined with KG…

Machine Learning · Computer Science 2022-07-27 Stephen Bonner , Ufuk Kirik , Ola Engkvist , Jian Tang , Ian P Barrett