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Perfusion-weighted magnetic resonance imaging (MRI) is an imaging technique that allows one to measure tissue perfusion in an organ of interest through the injection of an intravascular paramagnetic contrast agent (CA). Due to a preference…

Computer Vision and Pattern Recognition · Computer Science 2017-08-28 Cagdas Ulas , Christine Preibisch , Jonathan Sperl , Thomas Pyka , Jayashree Kalpathy-Cramer , Bjoern Menze

We propose a dictionary-matching-free pipeline for multi-parametric quantitative MRI image computing. Our approach has two stages based on compressed sensing reconstruction and deep learned quantitative inference. The reconstruction phase…

Computer Vision and Pattern Recognition · Computer Science 2020-04-23 Mohammad Golbabaee , Guido Buonincontri , Carolin Pirkl , Marion Menzel , Bjoern Menze , Mike Davies , Pedro Gomez

Purpose: To improve the accuracy of multiparametric estimation, including myelin water fraction (MWF) quantification, and reduce scan time in 3D-QALAS by optimizing sequence parameters, using a self-supervised multilayer perceptron network.…

Purpose: To develop a method for rapid sub-millimeter T1, T2, T2* and QSM mapping in a single scan using multi-contrast Learned Acquisition and Reconstruction Optimization (mcLARO). Methods: A pulse sequence was developed by interleaving…

Image and Video Processing · Electrical Eng. & Systems 2023-11-28 Jinwei Zhang , Thanh D. Nguyen , Eddy Solomon , Chao Li , Qihao Zhang , Jiahao Li , Hang Zhang , Pascal Spincemaille , Yi Wang

This paper presents a deep learning method for faster magnetic resonance imaging (MRI) by reducing k-space data with sub-Nyquist sampling strategies and provides a rationale for why the proposed approach works well. Uniform subsampling is…

Machine Learning · Statistics 2019-05-14 Chang Min Hyun , Hwa Pyung Kim , Sung Min Lee , Sungchul Lee , Jin Keun Seo

There is much recent interest in techniques to accelerate the data acquisition process in MRI by acquiring limited measurements. Often sophisticated reconstruction algorithms are deployed to maintain high image quality in such settings. In…

Image and Video Processing · Electrical Eng. & Systems 2022-05-20 Zhishen Huang , Saiprasad Ravishankar

Despite its exceptional soft tissue contrast, Magnetic Resonance Imaging (MRI) faces the challenge of long scanning times compared to other modalities like X-ray radiography. Shortening scanning times is crucial in clinical settings, as it…

Machine Learning · Computer Science 2023-12-08 Thomas Sanchez

We propose a deep learning-based approach that integrates MRI sequence parameters to improve the accuracy and generalizability of quantitative image synthesis from clinical weighted MRI. Our physics-driven neural network embeds MRI sequence…

Image and Video Processing · Electrical Eng. & Systems 2025-08-12 Lingjing Chen , Chengxiu Zhang , Yinqiao Yi , Yida Wang , Yang Song , Xu Yan , Shengfang Xu , Dalin Zhu , Mengqiu Cao , Yan Zhou , Chenglong Wang , Guang Yang

Compressed sensing applied to magnetic resonance imaging (MRI) allows to reduce the scanning time by enabling images to be reconstructed from highly undersampled data. In this paper, we tackle the problem of designing a sampling mask for an…

Image and Video Processing · Electrical Eng. & Systems 2020-03-17 Thomas Sanchez , Baran Gözcü , Ruud B. van Heeswijk , Armin Eftekhari , Efe Ilıcak , Tolga Çukur , Volkan Cevher

Reconstructing high-quality images from substantially undersampled k-space data for accelerated MRI presents a challenging ill-posed inverse problem. While supervised deep learning has revolutionized this field, it relies heavily on large…

Image and Video Processing · Electrical Eng. & Systems 2025-12-22 Xinzhe Luo , Yingzhen Li , Chen Qin

This paper proposes a statistical framework to optimize and evaluate the MR parameter $T_1$ and $T_2$ mapping capabilities for quantitative MRI relaxometry approaches. This analysis explores the intrinsic MR parameter estimate precision per…

Signal Processing · Electrical Eng. & Systems 2020-01-03 Yang Liu , John R. Buck , Shaokuan Zheng

Symbolic representations of time series have proven to be effective for time series classification, with many recent approaches including SAX-VSM, BOSS, WEASEL, and MrSEQL. The key idea is to transform numerical time series to symbolic…

Machine Learning · Computer Science 2022-03-16 Thach Le Nguyen , Georgiana Ifrim

Clinical time-series data are difficult to model with methods designed for regular sequences because they exhibit irregular sampling, frequent missing values, and heterogeneous observation patterns across variables. Existing approaches…

Machine Learning · Computer Science 2026-05-19 Jinwoong Kim , Sangjin Park

Undersampling is a common method in Magnetic Resonance Imaging (MRI) to subsample the number of data points in k-space, reducing acquisition times at the cost of decreased image quality. A popular approach is to employ undersampling…

Image and Video Processing · Electrical Eng. & Systems 2023-08-23 Tobias Weber , Michael Ingrisch , Bernd Bischl , David Rügamer

Image reconstruction from undersampled k-space data plays an important role in accelerating the acquisition of MR data, and a lot of deep learning-based methods have been exploited recently. Despite the achieved inspiring results, the…

Computer Vision and Pattern Recognition · Computer Science 2021-09-28 Chen Hu , Cheng Li , Haifeng Wang , Qiegen Liu , Hairong Zheng , Shanshan Wang

Large medical imaging data sets are becoming increasingly available, but ensuring sample quality without significant artefacts is challenging. Existing methods for identifying imperfections in medical imaging rely on data-intensive…

Image and Video Processing · Electrical Eng. & Systems 2023-11-15 Daniele Ravi , Frederik Barkhof , Daniel C. Alexander , Lemuel Puglisi , Geoffrey JM Parker , Arman Eshaghi

Dynamic Magnetic Resonance Imaging (MRI) is known to be a powerful and reliable technique for the dynamic imaging of internal organs and tissues, making it a leading diagnostic tool. A major difficulty in using MRI in this setting is the…

Image and Video Processing · Electrical Eng. & Systems 2023-03-24 Tamir Shor , Tomer Weiss , Dor Noti , Alex Bronstein

The advanced magnetic resonance (MR) image reconstructions such as the compressed sensing and subspace-based imaging are considered as large-scale, iterative, optimization problems. Given the large number of reconstructions required by the…

Computational Engineering, Finance, and Science · Computer Science 2020-06-26 Tianjian Lu , Thibault Marin , Yue Zhuo , Yi-Fan Chen , Chao Ma

We study signal processing tasks in which the signal is mapped via some generalized time-frequency transform to a higher dimensional time-frequency space, processed there, and synthesized to an output signal. We show how to approximate such…

Numerical Analysis · Mathematics 2021-09-07 Ron Levie , Haim Avron , Gitta Kutyniok

Phase-contrast magnetic resonance imaging (MRI) provides time-resolved quantification of blood flow dynamics that can aid clinical diagnosis. Long in vivo scan times due to repeated three-dimensional (3D) volume sampling over cardiac phases…

Image and Video Processing · Electrical Eng. & Systems 2020-04-22 Valery Vishnevskiy , Jonas Walheim , Sebastian Kozerke