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We prove algorithmic weak and \Szemeredi{} regularity lemmas for several classes of sparse graphs in the literature, for which only weak regularity lemmas were previously known. These include core-dense graphs, low threshold rank graphs,…

Data Structures and Algorithms · Computer Science 2025-05-30 Greg Bodwin , Santosh Vempala

Finding frequently occurring subgraph patterns or network motifs in neural architectures is crucial for optimizing efficiency, accelerating design, and uncovering structural insights. However, as the subgraph size increases,…

Machine Learning · Computer Science 2026-02-04 Yikang Yang , Zhengxin Yang , Minghao Luo , Luzhou Peng , Hongxiao Li , Wanling Gao , Lei Wang , Jianfeng Zhan

Probabilistic inferences distill knowledge from graphs to aid human make important decisions. Due to the inherent uncertainty in the model and the complexity of the knowledge, it is desirable to help the end-users understand the inference…

Social and Information Networks · Computer Science 2019-08-21 Chao Chen , Yifei Liu , Xi Zhang , Sihong Xie

Let G be an input graph with n vertices and m edges and let k be a fixed parameter. We provide a single exponential FPT algorithm with running time O(c^kn(n+m)), c= min {18,k} that turns graph G into an interval graph by deleting at most k…

Data Structures and Algorithms · Computer Science 2016-02-09 Arash Rafiey

For two correlated graphs which are independently sub-sampled from a common Erd\H{o}s-R\'enyi graph $\mathbf{G}(n, p)$, we wish to recover their \emph{latent} vertex matching from the observation of these two graphs \emph{without labels}.…

Statistics Theory · Mathematics 2022-05-31 Jian Ding , Hang Du

Interval graphs are intersection graphs of closed intervals of the real-line. The well-known computational problem, called recognition, asks whether an input graph $G$ can be represented by closed intervals, i.e., whether $G$ is an interval…

Discrete Mathematics · Computer Science 2014-05-20 Pavel Klavík , Jan Kratochvíl , Yota Otachi , Toshiki Saitoh , Tomáš Vyskočil

Several causal discovery algorithms have been proposed. However, when the sample size is small relative to the number of variables, the accuracy of estimating causal graphs using existing methods decreases. And some methods are not feasible…

Machine Learning · Statistics 2025-10-06 Ming Cai , Hisayuki Hara

It is well known that the spectrum and the Smith normal form of a matrix can be computed in polynomial time. Thus, it is interesting to explore how good are these parameters for distinguishing graphs. This is relevant since it is related to…

Combinatorics · Mathematics 2023-09-28 Carlos A. Alfaro , Ralihe R. Villagrán , Octavio Zapata

In the work [$\mathcal{O}(m\cdot n)$ algorithms for the recognition and isomorphism problems on circular-arc graphs, SIAM J. Comput. 24(3), 411--439, (1995)], Wen-Lian Hsu claims three results concerning the class of circular-arc graphs: -…

Data Structures and Algorithms · Computer Science 2024-11-27 Tomasz Krawczyk

Reducing the running time of graph algorithms is vital for tackling real-world problems such as shortest paths and matching in large-scale graphs, where path information plays a crucial role. To address this critical challenge, this paper…

Data Structures and Algorithms · Computer Science 2026-04-14 Akshar Chavan , Sanaz Rabinia , Daniel Grosu , Marco Brocanelli

Subgraph detection has recently been one of the most studied problems in the CONGEST model of distributed computing. In this work, we study the distributed complexity of problems closely related to subgraph detection, mainly focusing on…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-12-08 Janne H. Korhonen , Amir Nikabadi

A \emph{mixed interval graph} is an interval graph that has, for every pair of intersecting intervals, either an arc (directed arbitrarily) or an (undirected) edge. We are particularly interested in scenarios where edges and arcs are…

Discrete Mathematics · Computer Science 2024-08-09 Grzegorz Gutowski , Konstanty Junosza-Szaniawski , Felix Klesen , Paweł Rzążewski , Alexander Wolff , Johannes Zink

For an arbitrary, fixed graph (pattern graph), we study the algorithmic complexity of counting homomorphisms, subgraph isomorphisms, and induced subgraph isomorphisms from the pattern graph to $n$-vertex, $d$-degenerate graphs as input.…

Data Structures and Algorithms · Computer Science 2025-11-07 Balagopal Komarath , Anant Kumar , Akash Pareek

Subgraph counting is a fundamental task for analyzing structural patterns in graph-structured data, with important applications in domains such as computational biology and social network analysis, where recurring motifs reveal functional…

Machine Learning · Computer Science 2025-12-02 Shubhajit Roy , Shrutimoy Das , Binita Maity , Anant Kumar , Anirban Dasgupta

We describe the missing class of the hierarchy of mixed unit interval graphs, generated by the intersection graphs of closed, open and one type of half-open intervals of the real line. This class lies strictly between unit interval graphs…

Discrete Mathematics · Computer Science 2017-02-22 Alexandre Talon , Jan Kratochvíl

We introduce invariants of spatial graphs related to the Wu invariant and the Simon invariant, and apply them to prove that certain graphs are intrinsically chiral, and to obtain lower bounds for the minimal crossing number of embedded…

Geometric Topology · Mathematics 2019-02-20 Erica Flapan , Will Fletcher , Ryo Nikkuni

In the past decades for more and more graph classes the Graph Isomorphism Problem was shown to be solvable in polynomial time. An interesting family of graph classes arises from intersection graphs of geometric objects. In this work we show…

Data Structures and Algorithms · Computer Science 2016-06-23 Daniel Neuen

We provide a general framework for computing lower-bounds on the sample complexity of recovering the underlying graphs of Ising models, given i.i.d samples. While there have been recent results for specific graph classes, these involve…

Machine Learning · Computer Science 2014-12-09 Karthikeyan Shanmugam , Rashish Tandon , Alexandros G. Dimakis , Pradeep Ravikumar

We give an algorithm that, given graphs $G$ and $H$, tests whether $H$ is a minor of $G$ in time ${\cal O}_H(n^{1+o(1)})$; here, $n$ is the number of vertices of $G$ and the ${\cal O}_H(\cdot)$-notation hides factors that depend on $H$ and…

Data Structures and Algorithms · Computer Science 2024-04-08 Tuukka Korhonen , Michał Pilipczuk , Giannos Stamoulis

In recent years several compressed indexes based on variants of the Burrows-Wheeler transformation have been introduced. Some of these index structures far more complex than a single string, as was originally done with the FM-index…

Computational Complexity · Computer Science 2019-02-27 Daniel Gibney , Sharma V. Thankachan