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Hypertree decompositions (HDs), as well as the more powerful generalized hypertree decompositions (GHDs), and the yet more general fractional hypertree decompositions (FHDs) are hypergraph decomposition methods successfully used for…

Computational Complexity · Computer Science 2021-11-22 Georg Gottlob , Matthias Lanzinger , Reinhard Pichler , Igor Razgon

The independence number of a tree decomposition is the size of a largest independent set contained in a single bag. The tree-independence number of a graph $G$ is the minimum independence number of a tree decomposition of $G$. As shown…

Data Structures and Algorithms · Computer Science 2026-01-23 Daniel Lokshtanov , Michał Pilipczuk , Paweł Rzążewski

In the Feedback Vertex Set problem, one is given an undirected graph $G$ and an integer $k$, and one needs to determine whether there exists a set of $k$ vertices that intersects all cycles of $G$ (a so-called feedback vertex set). Feedback…

Data Structures and Algorithms · Computer Science 2019-11-04 Jason Li , Jesper Nederlof

The fundamental sparsest cut problem takes as input a graph $G$ together with the edge costs and demands, and seeks a cut that minimizes the ratio between the costs and demands across the cuts. For $n$-node graphs~$G$ of treewidth~$k$,…

Data Structures and Algorithms · Computer Science 2024-04-23 Parinya Chalermsook , Matthias Kaul , Matthias Mnich , Joachim Spoerhase , Sumedha Uniyal , Daniel Vaz

We present the first sub-quadratic time algorithm that with high probability correctly reconstructs phylogenetic trees for short sequences generated by a Markov model of evolution. Due to rapid expansion in sequence databases, such very…

Populations and Evolution · Quantitative Biology 2012-06-01 Daniel G. Brown , Jakub Truszkowski

We present a randomized algorithm that computes a constant approximation of a graph's arboricity, using $\tilde{O}(n/\lambda)$ queries to adjacency lists and in the same time bound. Here, $n$ and $\lambda$ denote the number of nodes and the…

Data Structures and Algorithms · Computer Science 2025-12-23 Jiangqi Dai , Mohsen Ghaffari , Julian Portmann

A stable or locally-optimal cut of a graph is a cut whose weight cannot be increased by changing the side of a single vertex. In this paper we study Minimum Stable Cut, the problem of finding a stable cut of minimum weight. Since this…

Computational Complexity · Computer Science 2026-04-08 Michael Lampis

The Planar Steiner Tree problem is one of the most fundamental NP-complete problems as it models many network design problems. Recall that an instance of this problem consists of a graph with edge weights, and a subset of vertices (often…

Data Structures and Algorithms · Computer Science 2018-11-19 Sándor Kisfaludi-Bak , Jesper Nederlof , Erik Jan van Leeuwen

We present a method for reducing the treewidth of a graph while preserving all the minimal $s-t$ separators. This technique turns out to be very useful for establishing the fixed-parameter tractability of constrained separation and…

Data Structures and Algorithms · Computer Science 2010-02-03 Dániel Marx , Barry O'Sullivan , Igor Razgon

We present $k^{O(k^2)} m$ time algorithms for various problems about decomposing a given undirected graph by edge cuts or vertex separators of size $<k$ into parts that are ``well-connected'' with respect to cuts or separators of size $<k$;…

Data Structures and Algorithms · Computer Science 2024-11-06 Tuukka Korhonen

We give a 2-approximation algorithm for Non-Uniform Sparsest Cut that runs in time $n^{O(k)}$, where $k$ is the treewidth of the graph. This improves on the previous $2^{2^k}$-approximation in time $\poly(n) 2^{O(k)}$ due to Chlamt\'a\v{c}…

Data Structures and Algorithms · Computer Science 2013-05-08 Anupam Gupta , Kunal Talwar , David Witmer

In this experimental study we consider Steiner tree approximations that guarantee a constant approximation of ratio smaller than $2$. The considered greedy algorithms and approaches based on linear programming involve the incorporation of…

Data Structures and Algorithms · Computer Science 2015-12-10 Stephan Beyer , Markus Chimani

In this paper, we study Reiter's propositional default logic when the treewidth of a certain graph representation (semi-primal graph) of the input theory is bounded. We establish a dynamic programming algorithm on tree decompositions that…

Artificial Intelligence · Computer Science 2018-01-03 Johannes K. Fichte , Markus Hecher , Irina Schindler

The Maximum Agreement Forest (Maf) problem is a well-studied problem in evolutionary biology, which asks for a largest common subforest of a given collection of phylogenetic trees with identical leaf label-set. However, the previous work…

Data Structures and Algorithms · Computer Science 2014-11-04 Feng Shi , Jianer Chen , Qilong Feng , Xiaojun Ding , Jianxin Wang

Tree decompositions were developed by Robertson and Seymour. Since then algorithms have been developed to solve intractable problems efficiently for graphs of bounded treewidth. In this paper we extend tree decompositions to allow cycles to…

Data Structures and Algorithms · Computer Science 2007-05-23 Melanie J. Agnew , Christopher M. Homan

We improve the running time of the general algorithmic technique known as Baker's approach (1994) on H-minor-free graphs from O(n^{f(|H|)}) to O(f(|H|) n^{O(1)}). The numerous applications include e.g. a 2-approximation for coloring and…

Data Structures and Algorithms · Computer Science 2015-05-18 Siamak Tazari

The graph parameter of pathwidth can be seen as a measure of the topological resemblance of a graph to a path. A popular definition of pathwidth is given in terms of node search where we are given a system of tunnels that is contaminated by…

Data Structures and Algorithms · Computer Science 2022-09-13 Mamadou Moustapha Kanté , Christophe Paul , Dimitrios M. Thilikos

We consider a variant of treewidth that we call clique-partitioned treewidth in which each bag is partitioned into cliques. This is motivated by the recent development of FPT-algorithms based on similar parameters for various problems. With…

Data Structures and Algorithms · Computer Science 2023-02-20 Thomas Bläsius , Maximilian Katzmann , Marcus Wilhelm

We study low rank approximation of tensors, focusing on the tensor train and Tucker decompositions, as well as approximations with tree tensor networks and more general tensor networks. For tensor train decomposition, we give a bicriteria…

Data Structures and Algorithms · Computer Science 2023-11-28 Arvind V. Mahankali , David P. Woodruff , Ziyu Zhang

In the PATH COVER problem, one asks to cover the vertices of a graph using the smallest possible number of (not necessarily disjoint) paths. While the variant where the paths need to be pairwise vertex-disjoint, which we call PATH…

Data Structures and Algorithms · Computer Science 2025-11-11 Florent Foucaud , Atrayee Majumder , Tobias Mömke , Aida Roshany-Tabrizi