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These notes develop aspects of perturbation theory of matrices related to so-called diagonalisation schemes. Primary focus is on constructive tools to derive asymptotic expansions for small/large parameters of eigenvalues and…

Analysis of PDEs · Mathematics 2010-12-23 Kay Jachmann , Jens Wirth

High-order harmonic generation is a powerful and sensitive tool for probing atomic and molecular structures, combining in the same measurement an unprecedented attosecond temporal resolution with a high spatial resolution, of the order of…

Chemical Physics · Physics 2015-06-23 M. Negro , M. Devetta , D. Faccialà , S. De Silvestri , C. Vozzi , S. Stagira

Graphs serve as powerful tools for modeling pairwise interactions in diverse fields such as biology, material science, and social networks. However, they inherently overlook interactions involving more than two entities. Simplicial…

Algebraic Topology · Mathematics 2024-12-05 Xiang Liu , Ran Liu , Jingyan Li , Rongling Wu , Jie Wu

We investigate high-order harmonic generation (HHG) in graphene with a quantum master equation approach. The simulations reproduce the observed enhancement in HHG in graphene under elliptically polarized light [N. Yoshikawa et al, Science…

Materials Science · Physics 2021-02-03 Shunsuke A. Sato , Hideki Hirori , Yasuyuki Sanari , Yoshihiko Kanemitsu , Angel Rubio

Order parameters based on spherical harmonics and Fourier coefficients already play a significant role in condensed matter research in the context of systems of spherical or point particles. Here, we extend these types of order parameter to…

Soft Condensed Matter · Physics 2010-12-22 Aaron S. Keys , Christopher R. Iacovella , Sharon C. Glotzer

This work explores the tensor and combinatorial constructs underlying the linearised higher-order variational equations of a generic autonomous system along a particular solution. The main result of this paper is a compact yet explicit and…

Exactly Solvable and Integrable Systems · Physics 2015-02-11 Sergi Simon

The k-truss model is one of the most important models in cohesive subgraph analysis. The k-truss decomposition problem is to compute the trussness of each edge in a given graph, and has been extensively studied. However, the conventional…

Data Structures and Algorithms · Computer Science 2024-11-12 Chen Chen , Jingya Qian , Hui Luo , Yongye Li , Xiaoyang Wang

Advances in numerical optimization have supported breakthroughs in several areas of signal processing. This paper focuses on the recent enhanced variants of the proximal gradient numerical optimization algorithm, which combine quasi-Newton…

Signal Processing · Electrical Eng. & Systems 2020-01-28 Niccolò Antonello , Lorenzo Stella , Panagiotis Patrinos , Toon van Waterschoot

Here we introduce simple structures for the analysis of complex hypergraphs, hypergraph animals. These structures are designed to describe the local node neighbourhoods of nodes in hypergraphs. We establish their relationships to lattice…

Molecular Networks · Quantitative Biology 2024-07-08 Michael P. H. Stumpf

We consider time-periodically perturbed 1D Hamiltonian systems possessing one or more separatrices. If the perturbation is weak, then the separatrix chaos is most developed when the perturbation frequency lies in the logarithmically small…

Chaotic Dynamics · Physics 2015-05-13 S. M. Soskin , R. Mannella , O. M. Yevtushenko , I. A. Khovanov , P. V. E. McClintock

The irreducible complexity of natural phenomena has led Graph Neural Networks to be employed as a standard model to perform representation learning tasks on graph-structured data. While their capacity to capture local and global patterns is…

Machine Learning · Computer Science 2024-02-13 Lorenzo Giusti

A combination of hierarchical tree-like data structures and data access patterns from fast multipole methods and hierarchical low-rank approximation of linear operators from H-matrix methods appears to form an algorithmic path forward for…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-06-10 Rio Yokota , George Turkiyyah , David Keyes

Graph matching is a challenging problem with very important applications in a wide range of fields, from image and video analysis to biological and biomedical problems. We propose a robust graph matching algorithm inspired in…

Optimization and Control · Mathematics 2013-11-26 Marcelo Fiori , Pablo Sprechmann , Joshua Vogelstein , Pablo Musé , Guillermo Sapiro

Higher-order tensors have received increased attention across science and engineering. While most tensor decomposition methods are developed for a single tensor observation, scientific studies often collect side information, in the form of…

Methodology · Statistics 2021-10-29 Jiaxin Hu , Chanwoo Lee , Miaoyan Wang

Hierarchical abstractions are a methodology for solving large-scale graph problems in various disciplines. Coarsening is one such approach: it generates a pyramid of graphs whereby the one in the next level is a structural summary of the…

Machine Learning · Computer Science 2020-12-08 Tengfei Ma , Jie Chen

In traditional topology optimization, the computing time required to iteratively update the material distribution within a design domain strongly depends on the complexity or size of the problem, limiting its application in real engineering…

Computational Engineering, Finance, and Science · Computer Science 2024-05-14 Gabriel Garayalde , Matteo Torzoni , Matteo Bruggi , Alberto Corigliano

Recent years have witnessed a trend that advanced mathematical tools, such as algebraic topology, differential geometry, graph theory, and partial differential equations, have been developed for describing biological macromolecules. These…

Biomolecules · Quantitative Biology 2019-08-05 Rundong Zhao , Menglun Wang , Yiying Tong , Guo-Wei Wei

Topological methods, including persistent homology, are powerful tools for analysis of high-dimensional data sets but these methods rely almost exclusively on thresholding techniques. In noisy data sets, thresholding does not always allow…

Computational Geometry · Computer Science 2016-09-08 Jennifer Kloke , Gunnar Carlsson

Models involving hybrid systems are versatile in their application but difficult to optimize efficiently due to their combinatorial nature. This work presents a method to cope with hybrid optimal control problems which, in contrast to…

Optimization and Control · Mathematics 2025-05-20 Viktoriya Nikitina , Alberto De Marchi , Matthias Gerdts

Inferring topological and geometrical information from data can offer an alternative perspective on machine learning problems. Methods from topological data analysis, e.g., persistent homology, enable us to obtain such information,…

Computer Vision and Pattern Recognition · Computer Science 2018-02-19 Christoph Hofer , Roland Kwitt , Marc Niethammer , Andreas Uhl