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Many complex adaptive systems contain a large diversity of specialized components. The specialization at the level of the microscopic degrees of freedom, and diversity at the level of the system as a whole are phenomena that appear during…

adap-org · Physics 2007-05-23 Vivek S. Borkar , Sanjay Jain , Govindan Rangarajan

A periodic behavior is a well observed phenomena in biological and economical systems. We show that evolutionary games on graphs with imitation dynamics can display periodic behavior for an arbitrary choice of game theoretical parameters…

Dynamical Systems · Mathematics 2018-05-11 Jeremias Epperlein , Vladimír Švígler

Which factors govern the evolution of mutation rates and emergence of species? Here, we address this question using a first principles model of life where population dynamics of asexual organisms is coupled to molecular properties and…

Populations and Evolution · Quantitative Biology 2009-11-13 Muyoung Heo , Louis Kang , Eugene I. Shakhnovich

We consider a physical model where the total energy is governed by surface tension and attractive screened Coulomb potential on the 3-dimensional space. We obtain different periodic equilibrium patterns i.e. stationary sets for this energy,…

Analysis of PDEs · Mathematics 2017-11-30 Mouhamed Moustapha Fall

A punctuated equilibrium model of biological evolution with relative fitness between different species being the fundamental driving force of evolution is introduced. Mutation is modeled as a fitness updating cellular automaton process…

Condensed Matter · Physics 2015-06-25 H. F. Chau , L. Mak , P. K. Kwok

Evolutionary transitions among ecological interactions are widely known, although their detailed dynamics remain absent for most population models. Adaptive dynamics has been used to illustrate how the parameters of population models might…

Populations and Evolution · Quantitative Biology 2022-11-14 Luciano Stucchi , Javier Galeano , Juan Manuel Pastor , José María Iriondo , José A. Cuesta

Mimicry is a resemblance between species that benefits at least one of the species. It is a ubiquitous evolutionary phenomenon particularly common among prey species, in which case the advantage involves better protection from predation. We…

Populations and Evolution · Quantitative Biology 2011-08-09 Alexey Mikaberidze , Masudul Haque

A little over 25 years ago Pemantle pioneered the study of the contact process on trees, and showed that the critical values $\lambda_1$ and $\lambda_2$ for global and local survival were different. Here, we will consider the case of trees…

Probability · Mathematics 2019-01-21 Yufeng Jiang , Remy Kassem , Grayson York , Brandon Zhao , Xiangying Huang , Matthew Junge , Rick Durrett

We model a situation in which a collection of species derive their fitnesses via a rock-paper-scissors-type game; however, the precise payoffs are a function of the environment. The new aspect of our model lies in adding a feedback loop:…

Dynamical Systems · Mathematics 2017-11-01 Tung Mai , Ioannis Panageas , Will Ratcliff , Vijay V. Vazirani , Peter Yunker

The statistical properties of an ecosystem composed of species interacting via pairwise, random interactions and deterministic, concentration limiting self-interaction are studied analytically with tools of equilibrium statistical mechanics…

Disordered Systems and Neural Networks · Physics 2009-11-07 Viviane M. de Oliveira , J. F. Fontanari

Due to the conventional distinction between ecological (rapid) and evolutionary (slow)timescales, ecological and population models to date have typically ignored the effects of evolution. Yet the potential for rapid evolutionary change has…

Populations and Evolution · Quantitative Biology 2012-11-20 Laura E. Jones , Stephen P. Ellner

The spatio-temporal arrangement of interacting populations often influences the maintenance of species diversity and is a subject of intense research. Here, we study the spatio-temporal patterns arising from the cyclic competition between…

Populations and Evolution · Quantitative Biology 2014-09-10 Bartosz Szczesny , Mauro Mobilia , Alastair M. Rucklidge

We consider a contact process on $Z^d$ with two species that interact in a symbiotic manner. Each site can either be vacant or occupied by individuals of species $A$ and/or $B$. Multiple occupancy by the same species at a single site is…

Probability · Mathematics 2019-12-11 Rick Durrett , Dong Yao

We study a lattice model of a multi-species prey-predator system. Numerical results show that for a small mutation rate the model develops irregular long-period oscillatory behavior with sizeable changes in a number of species. The…

Other Condensed Matter · Physics 2009-11-10 Adam Lipowski

Evolutionary and ecosystem dynamics are often treated as different processes --operating at separate timescales-- even if evidence reveals that rapid evolutionary changes can feed back into ecological interactions. A recent long-term field…

Populations and Evolution · Quantitative Biology 2018-10-04 Paula Villa Martín , Jorge Hidalgo , Rafael Rubio de Casas , Miguel A. Muñoz

A mathematical model of interacting species filling ecological niches left by the extinction of others is introduced. Species organize themselves into genera of all sizes. The size of a genus on average grows linearly with its age,…

Condensed Matter · Physics 2008-02-03 Susanna Manrubia , Maya Paczuski

We study numerically domain growth and interface fluctuations in one- and two-dimensional lattice systems composed of four species that interact in a cyclic way. Particle mobility is implemented through exchanges of particles located on…

Statistical Mechanics · Physics 2015-06-05 Ahmed Roman , David Konrad , Michel Pleimling

We study a set of six-species ecological models where each species has two predators and two preys. On a square lattice the time evolution is governed by iterated invasions between the neighboring predator-prey pairs chosen at random and by…

Populations and Evolution · Quantitative Biology 2009-11-10 Gyorgy Szabo

It is well known that life on Earth alters its environment over evolutionary and geological timescales. An important open question is whether this is a result of evolutionary optimization or a universal feature of life. In the latter case,…

Adaptation and Self-Organizing Systems · Physics 2017-04-26 Cole Mathis , Tanmoy Bhattacharya , Sara Imari Walker

We present an individual based model of evolutionary ecology. The reproduction rate of individuals characterized by their genome depends on the composition of the population in genotype space. Ecological features such as the taxonomy and…

Statistical Mechanics · Physics 2016-08-31 Matt Hall , Kim Christensen , Simone A. di Collobiano , Henrik Jeldtoft Jensen