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Metagenomic studies have increasingly utilized sequencing technologies in order to analyze DNA fragments found in environmental samples.One important step in this analysis is the taxonomic classification of the DNA fragments. Conventional…

Genomics · Quantitative Biology 2020-02-11 Andreas Georgiou , Vincent Fortuin , Harun Mustafa , Gunnar Rätsch

Insider threats, as one type of the most challenging threats in cyberspace, usually cause significant loss to organizations. While the problem of insider threat detection has been studied for a long time in both security and data mining…

Cryptography and Security · Computer Science 2020-05-27 Shuhan Yuan , Xintao Wu

DNA is an attractive medium for digital data storage. When data is stored on DNA, errors occur, which makes error-correcting coding techniques critical for reliable DNA data storage. To reduce the errors, a common technique is to include…

Information Theory · Computer Science 2024-06-27 Franziska Weindel , Andreas L. Gimpel , Robert N. Grass , Reinhard Heckel

In recent years machine learning algorithms, and more specifically deep learning algorithms, have been widely used in many fields, including cyber security. However, machine learning systems are vulnerable to adversarial attacks, and this…

Machine Learning · Computer Science 2021-03-16 Ihai Rosenberg , Asaf Shabtai , Yuval Elovici , Lior Rokach

Owing to its immense storage density and durability, DNA has emerged as a promising storage medium. However, due to technological constraints, data can only be written onto many short DNA molecules called data blocks that are stored in an…

Information Theory · Computer Science 2024-03-26 Shubhransh Singhvi , Charchit Gupta , Avital Boruchovsky , Yuval Goldberg , Han Mao Kiah , Eitan Yaakobi

The rapid integration of the Internet of Things (IoT) and Internet of Medical (IoM) devices in the healthcare industry has markedly improved patient care and hospital operations but has concurrently brought substantial risks. Distributed…

Cryptography and Security · Computer Science 2025-01-31 Zag ElSayed , Ahmed Abdelgawad , Nelly Elsayed

Modern tools for biological research, especially microscopy, have rapidly advanced in recent years, which has led to the generation of increasingly large amounts of data on a regular basis. The result is that scientists desperately need…

Other Quantitative Biology · Quantitative Biology 2021-08-18 Andrey Andreev , Tom Morrell , Kristin Briney , Sandra Gesing , Uri Manor

As sequencing technologies become more affordable and genomic databases expand continuously, the reuse of publicly available sequencing data emerges as a powerful strategy for studying microbial pathogens. Indeed, raw sequencing reads…

Quantitative Methods · Quantitative Biology 2025-05-16 Damien Richard , Nils Poulicard

While state-of-the-art Deep Neural Network (DNN) models are considered to be robust to random perturbations, it was shown that these architectures are highly vulnerable to deliberately crafted perturbations, albeit being…

Machine Learning · Computer Science 2021-06-03 Omer Faruk Tuna , Ferhat Ozgur Catak , M. Taner Eskil

DNA as a data storage medium has several advantages, including far greater data density compared to electronic media. We propose that schemes for data storage in the DNA of living organisms may benefit from studying the reconstruction…

Information Theory · Computer Science 2019-09-10 Yonatan Yehezkeally , Moshe Schwartz

DNA sequencing is revolutionising the field of medicine. DNA sequencers, the machines which perform DNA sequencing, have evolved from the size of a fridge to that of a mobile phone over the last two decades. The cost of sequencing a human…

Genomics · Quantitative Biology 2021-01-14 Hasindu Gamaarachchi

Attack detection problems in the smart grid are posed as statistical learning problems for different attack scenarios in which the measurements are observed in batch or online settings. In this approach, machine learning algorithms are used…

Machine Learning · Computer Science 2015-03-24 Mete Ozay , Inaki Esnaola , Fatos T. Yarman Vural , Sanjeev R. Kulkarni , H. Vincent Poor

DNA is a promising medium for digital information storage for its exceptional density and durability. While prior studies advanced coding theory, workflow design, and simulation tools, challenges such as synthesis costs, sequencing errors,…

Emerging Technologies · Computer Science 2025-10-06 Rakesh Thakur , Lavanya Singh , Yashika , Manomay Bundawala , Aruna Kumar

This is Btech thesis report on detection and purification of adverserially attacked images. A deep learning model is trained on certain training examples for various tasks such as classification, regression etc. By training, weights are…

Machine Learning · Computer Science 2022-05-18 Dvij Kalaria

Today, large amounts of data are being continuously produced, collected, and exchanged between systems. As the number of devices, systems and data produced grows up, the risk of security breaches increases. This is all the more relevant in…

Databases · Computer Science 2023-03-21 Anastasija Nikiforova

Storing data in DNA is being explored as an efficient solution for archiving and in-object storage. Synthesis time and cost remain challenging, significantly limiting some applications at this stage. In this paper we investigate efficient…

Information Theory · Computer Science 2024-12-10 Amit Zrihan , Eitan Yaakobi , Zohar Yakhini

This work presents twelve fine-tuned deep learning architectures to solve the bacterial classification problem over the Digital Image of Bacterial Species Dataset. The base architectures were mainly published as mobile or efficient…

Computer Vision and Pattern Recognition · Computer Science 2021-06-14 R. Gallardo García , S. Jarquín Rodríguez , B. Beltrán Martínez , C. Hernández Gracidas , R. Martínez Torres

Neural machine learning methods, such as deep neural networks (DNN), have achieved remarkable success in a number of complex data processing tasks. These methods have arguably had their strongest impact on tasks such as image and audio…

The DNA storage channel is considered, in which the $M$ Deoxyribonucleic acid (DNA) molecules comprising each codeword are stored without order, sampled $N$ times with replacement, and then sequenced over a discrete memoryless channel. For…

Information Theory · Computer Science 2022-02-15 Nir Weinberger , Neri Merhav

In the current era, DeoxyriboNucleic Acid (DNA) based data storage emerges as an intriguing approach, garnering substantial academic interest and investigation. This paper introduces a novel deep joint source-channel coding (DJSCC) scheme…

Emerging Technologies · Computer Science 2023-11-03 Wenfeng Wu , Luping Xiang , Qiang Liu , Kun Yang