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Related papers: Isolating Patterns in Open Reaction-Diffusion Syst…

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Many existing studies on pattern formation in the reaction-diffusion systems rely on deterministic models. However, environmental noise is often a major factor which leads to significant changes in the spatiotemporal dynamics. In this…

Populations and Evolution · Quantitative Biology 2015-09-30 Anuj Kumar Sirohi , Malay Banerjee , Anirban Chakraborti

We survey recent results on reaction-diffusion equations with discontinuous hysteretic nonlinearities. We connect these equations with free boundary problems and introduce a related notion of spatial transversality for initial data and…

Analysis of PDEs · Mathematics 2015-08-11 Mark Curran , Pavel Gurevich , Sergey Tikhomirov

The family of autonomous reaction-diffusion models on a one-dimensional lattice with boundaries is studied. By autonomous, it is meant that the evolution equation for n-point functions contain only n- or less- point functions. It is shown…

Statistical Mechanics · Physics 2009-10-31 Amir Aghamohammadi , Mohammad Khorrami

A general reaction-diffusion equation with spatiotemporal delay and homogeneous Dirichlet boundary condition is considered. The existence and stability of positive steady state solutions are proved via studying an equivalent…

Analysis of PDEs · Mathematics 2021-02-24 Wenjie Zuo , Junping Shi

We discuss several qualitative properties of the solutions of reaction-diffusion systems and equations of the form $u_t = \epsilon^2 D \Delta u + f(u,x,\epsilon t)$, that are used in modeling pattern formation. We analyze the diffusion…

Molecular Networks · Quantitative Biology 2007-05-23 Ovidiu Radulescu , Sergei Vakulenko

The choice of boundary condition makes an essential difference in the solution structure of diffusion equations. The Dirichlet and Neumann boundary conditions and their combination have been the most used, but their legitimacy has been…

Analysis of PDEs · Mathematics 2023-08-02 Jaywan Chung , Seungmin Kang , Ho-Youn Kim , Yong-Jung Kim

The replicator equation is ubiquitous for many areas of mathematical biology. One of major shortcomings of this equation is that it does not allow for an explicit spatial structure. Here we review analytical approaches to include spatial…

Populations and Evolution · Quantitative Biology 2011-05-06 Artem S. Novozhilov , Vladimir P. Posvyanskii , Alexander S. Bratus

Properties of reaction zones resulting from A+B -> C type reaction-diffusion processes are investigated by analytical and numerical methods. The reagents A and B are separated initially and, in addition, there is an initial macroscopic…

Other Condensed Matter · Physics 2009-11-11 Ioana Bena , Michel Droz , Kirsten Martens , Zoltan Racz

In networks of nonlinear oscillators, symmetries place hard constraints on the system that can be exploited to predict universal dynamical features and steady-states, providing a rare generic organizing principle for far-from-equilibrium…

Pattern Formation and Solitons · Physics 2021-03-02 Ian Hunter , Michael M. Norton , Bolun Chen , Chris Simonetti , Maria Eleni Moustaka , Jonathan Touboul , Seth Fraden

Reaction networks are mathematical models of interacting chemical species that are primarily used in biochemistry. There are two modeling regimes that are typically used, one of which is deterministic and one that is stochastic. In…

Molecular Networks · Quantitative Biology 2018-09-14 David Anderson , Daniele Cappelletti

The rigorous asymptotics from reaction-cross-diffusion systems for three species with known entropy to cross-diffusion systems for two variables is investigated. The equations are studied in a bounded domain with no-flux boundary…

Analysis of PDEs · Mathematics 2017-10-11 E. S. Daus , L. Desvillettes , A. Jüngel

The emergence of stable disordered patterns in reactive system on spatially homogenous substrate is studied in the context of vegetation patterns in the semi-arid climatic zone. It is shown that reaction-diffusion systems that allow for…

Pattern Formation and Solitons · Physics 2009-11-11 Alon Manor , Nadav M. Shnerb

Field patterns occur in space-time microstructures such that a disturbance propagating along a characteristic line does not evolve into a cascade of disturbances, but rather concentrates on a pattern of characteristic lines. This pattern is…

Optics · Physics 2017-02-15 Graeme W. Milton , Ornella Mattei

Domain walls in equilibrium phase transitions propagate in a preferred direction so as to minimize the free energy of the system. As a result, initial spatio-temporal patterns ultimately decay toward uniform states. The absence of a…

patt-sol · Physics 2009-10-22 Aric Hagberg , Ehud Meron

Denoising diffusion models are a novel class of generative algorithms that achieve state-of-the-art performance across a range of domains, including image generation and text-to-image tasks. Building on this success, diffusion models have…

Machine Learning · Computer Science 2024-03-08 Nic Fishman , Leo Klarner , Valentin De Bortoli , Emile Mathieu , Michael Hutchinson

Bacteria can form a great variety of spatially heterogeneous cell density patterns, ranging from simple concentric rings to dynamical spiral waves appearing in growing colonies. These pattern formation phenomena are important as they…

Populations and Evolution · Quantitative Biology 2025-01-17 John S. Chuang , Riccardo Rao , Stanislas Leibler

Diffusion models have emerged as powerful generative models in the text-to-image domain. This paper studies their application as observation-to-action models for imitating human behaviour in sequential environments. Human behaviour is…

Robustness of spatial pattern against perturbations is an indispensable property of developmental processes for organisms, which need to adapt to changing environments. Although specific mechanisms for this robustness have been extensively…

Adaptation and Self-Organizing Systems · Physics 2017-04-05 Tetsuhiro S. Hatakeyama , Kunihiko Kaneko

Turing patterns are a central paradigm for describing spatial patterns in nature. The corresponding theory of reaction-diffusion dynamics combines ideal diffusion with nonlinear reactions, resulting in patterns when species diffuse at…

Biological Physics · Physics 2026-01-28 Cathelijne ter Burg , David Zwicker

This paper is devoted to investigate the pattern formation of a volume-filling chemotaxis model with logistic cell growth. We first apply the local stability analysis to establish sufficient conditions of destabilization for uniform…

Analysis of PDEs · Mathematics 2016-11-22 Yazhou Han , Zhongfang Li , Jicheng Tao , Manjun Ma
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