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Functional magnetic resonance imaging (fMRI) data provides information concerning activity in the brain and in particular the interactions between brain regions. Resting state fMRI data is widely used for inferring connectivities in the…

Applications · Statistics 2019-03-04 Christina Stoehr , John A D Aston , Claudia Kirch

Functional Magnetic Resonance Imaging (fMRI) relies on multi-step data processing pipelines to accurately determine brain activity; among them, the crucial step of spatial smoothing. These pipelines are commonly suboptimal, given the local…

Computer Vision and Pattern Recognition · Computer Science 2017-10-03 Albert Vilamala , Kristoffer Hougaard Madsen , Lars Kai Hansen

Despite the impressive advances achieved using deep learning for functional brain activity analysis, the heterogeneity of functional patterns and the scarcity of imaging data still pose challenges in tasks such as identifying neurological…

Image and Video Processing · Electrical Eng. & Systems 2025-05-30 Wenhui Cui , Haleh Akrami , Anand A. Joshi , Richard M. Leahy

Multi-parametric magnetic resonance (MR) imaging is an indispensable tool in the clinic. Consequently, automatic volume-of-interest segmentation based on multi-parametric MR imaging is crucial for computer-aided disease diagnosis, treatment…

Image and Video Processing · Electrical Eng. & Systems 2022-11-17 Cheng Li , Yousuf Babiker M. Osman , Weijian Huang , Zhenzhen Xue , Hua Han , Hairong Zheng , Shanshan Wang

High-resolution magnetic resonance imaging (MRI) is essential in clinical diagnosis. However, its long acquisition time remains a critical issue. Parallel imaging (PI) is a common approach to reduce acquisition time by periodically skipping…

Image and Video Processing · Electrical Eng. & Systems 2025-06-10 Hao Li , Yusheng Zhou , Jianan Liu , Xiling Liu , Tao Huang , Zhihan Lyu , Weidong Cai , Wei Chen

Implicit Neural Representation (INR) has emerged as an effective method for unsupervised image denoising. However, INR models are typically overparameterized; consequently, these models are prone to overfitting during learning, resulting in…

Computer Vision and Pattern Recognition · Computer Science 2024-01-04 Zipei Yan , Zhengji Liu , Jizhou Li

Recent denoising algorithms based on the "blind-spot" strategy show impressive blind image denoising performances, without utilizing any external dataset. While the methods excel in recovering highly contaminated images, we observe that…

Image and Video Processing · Electrical Eng. & Systems 2022-04-07 Chaewon Kim , Jaeho Lee , Jinwoo Shin

Detail features of magnetic resonance images play a cru-cial role in accurate medical diagnosis and treatment, as they capture subtle changes that pose challenges for doc-tors when performing precise judgments. However, the widely utilized…

Computer Vision and Pattern Recognition · Computer Science 2024-05-10 Mengxiao Geng , Jiahao Zhu , Xiaolin Zhu , Qiqing Liu , Dong Liang , Qiegen Liu

While medical imaging typically provides massive amounts of data, the extraction of relevant information for predictive diagnosis remains a difficult challenge. Functional MRI (fMRI) data, that provide an indirect measure of task-related or…

Computer Vision and Pattern Recognition · Computer Science 2011-02-22 Vincent Michel , Alexandre Gramfort , Gaël Varoquaux , Evelyn Eger , Bertrand Thirion

Magnetic resonance fingerprinting (MRF) quantifies multiple nuclear magnetic resonance parameters in a single and fast acquisition. Standard MRF reconstructs parametric maps using dictionary matching, which lacks scalability due to…

Computer Vision and Pattern Recognition · Computer Science 2019-06-06 Fabian Balsiger , Amaresha Shridhar Konar , Shivaprasad Chikop , Vimal Chandran , Olivier Scheidegger , Sairam Geethanath , Mauricio Reyes

Accelerated magnetic resonance (MR) imaging attempts to reduce acquisition time by collecting data below the Nyquist rate. As an ill-posed inverse problem, many plausible solutions exist, yet the majority of deep learning approaches…

Image and Video Processing · Electrical Eng. & Systems 2023-06-05 Jeffrey Wen , Rizwan Ahmad , Philip Schniter

In the last years, the design of image reconstruction methods in the field of quantitative Magnetic Resonance Imaging (qMRI) has experienced a paradigm shift. Often, when dealing with (quantitative) MR image reconstruction problems, one is…

Optimization and Control · Mathematics 2024-03-01 Andreas Kofler , Felix Frederik Zimmermann , Kostas Papafitsoros

This article presents a novel undersampled magnetic resonance imaging (MRI) technique that leverages the concept of Neural Radiance Field (NeRF). With radial undersampling, the corresponding imaging problem can be reformulated into an image…

Image and Video Processing · Electrical Eng. & Systems 2024-03-05 Tae Jun Jang , Chang Min Hyun

Healthcare data frequently contain a substantial proportion of missing values, necessitating effective time series imputation to support downstream disease diagnosis tasks. However, existing imputation methods focus on discrete data points…

Machine Learning · Computer Science 2025-05-19 Mengxuan Li , Ke Liu , Jialong Guo , Jiajun Bu , Hongwei Wang , Haishuai Wang

Magnetic resonance imaging (MRI) exam protocols consist of multiple contrast-weighted images of the same anatomy to emphasize different tissue properties. Due to the long acquisition times required to collect fully sampled k-space…

Image and Video Processing · Electrical Eng. & Systems 2023-06-08 Brett Levac , Ajil Jalal , Kannan Ramchandran , Jonathan I. Tamir

In recent times, a considerable number of research studies have been carried out to address the issue of Missing Value Imputation (MVI). MVI aims to provide a primary solution for datasets that have one or more missing attribute values. The…

Machine Learning · Computer Science 2024-10-14 Abu Fuad Ahmad , Khaznah Alshammari , Istiaque Ahmed , MD Shohel Sayed

Magnetic Resonance Imaging (MRI) is a pivotal clinical diagnostic tool, yet its extended scanning times often compromise patient comfort and image quality, especially in volumetric, temporal and quantitative scans. This review elucidates…

Multivariate analysis of fMRI data has benefited substantially from advances in machine learning. Most recently, a range of probabilistic latent variable models applied to fMRI data have been successful in a variety of tasks, including…

Image registration is essential for medical image applications where alignment of voxels across multiple images is needed for qualitative or quantitative analysis. With recent advancements in deep neural networks and parallel computing,…

Image and Video Processing · Electrical Eng. & Systems 2025-07-23 Yi Zhang , Yidong Zhao , Hui Xue , Peter Kellman , Stefan Klein , Qian Tao

Missing values widely exist in many real-world datasets, which hinders the performing of advanced data analytics. Properly filling these missing values is crucial but challenging, especially when the missing rate is high. Many approaches…

Machine Learning · Computer Science 2018-08-07 Hongbao Zhang , Pengtao Xie , Eric Xing