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In this paper, we introduce a generalization of graphlets to heterogeneous networks called typed graphlets. Informally, typed graphlets are small typed induced subgraphs. Typed graphlets generalize graphlets to rich heterogeneous networks…

Social and Information Networks · Computer Science 2020-10-28 Ryan A. Rossi , Nesreen K. Ahmed , Aldo Carranza , David Arbour , Anup Rao , Sungchul Kim , Eunyee Koh

A network can be analyzed at different topological scales, ranging from single nodes to motifs, communities, up to the complete structure. We propose a novel intermediate-level topological analysis that considers non-overlapping subgraphs…

Computational Physics · Physics 2009-11-13 Lucas Antiqueira , Luciano da Fontoura Costa

We consider intrinsic linking and knotting in the context of directed graphs. We construct an example of a directed graph that contains a consistently oriented knotted cycle in every embedding. We also construct examples of intrinsically…

Geometric Topology · Mathematics 2017-12-29 Thomas Fleming , Joel Foisy

Due to the limited resources and the scale of the graphs in modern datasets, we often get to observe a sampled subgraph of a larger original graph of interest, whether it is the worldwide web that has been crawled or social connections that…

Machine Learning · Computer Science 2018-12-04 Ashish Khetan , Harshay Shah , Sewoong Oh

Subgraph counting aims to count occurrences of a template T in a given network G(V, E). It is a powerful graph analysis tool and has found real-world applications in diverse domains. Scaling subgraph counting problems is known to be memory…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-10-06 Langshi Chen , Jiayu Li , Ariful Azad , Cenk Sahinalp , Madhav Marathe , Anil Vullikanti , Andrey Nikolaev , Egor Smirnov , Ruslan Israfilov , Judy Qiu

In the course of proving the strong perfect graph theorem, Chudnovsky, Robertson, Seymour, and Thomas showed that every perfect graph either belongs to one of five basic classes or admits one of several decompositions. Four of the basic…

Combinatorics · Mathematics 2012-03-05 Boris Alexeev , Alexandra Fradkin , Ilhee Kim

Graphlets are defined as k-node connected induced subgraph patterns. For an undirected graph, 3-node graphlets include close triangle and open triangle. When k = 4, there are six types of graphlets, e.g., tailed-triangle and clique are two…

Machine Learning · Computer Science 2018-10-09 Xutong Liu , Yu-Zhen Janice Chen , John C. S. Lui , Konstantin Avrachenkov

We apply model theoretic methods to the problem of existence of countable universal graphs with finitely many forbidden connected subgraphs. We show that to a large extent the question reduces to one of local finiteness of an…

Logic · Mathematics 2016-09-07 Gregory Cherlin , Saharon Shelah , Niandong Shi

The volume of data generated by internet and social networks is increasing every day, and there is a clear need for efficient ways of extracting useful information from them. As those data can take different forms, it is important to use…

Machine Learning · Statistics 2017-05-25 Bertrand Lebichot , Marco Saerens

Feature extraction and dimension reduction for networks is critical in a wide variety of domains. Efficiently and accurately learning features for multiple graphs has important applications in statistical inference on graphs. We propose a…

Applications · Statistics 2021-06-23 Shangsi Wang , Jesús Arroyo , Joshua T. Vogelstein , Carey E. Priebe

Counting the frequencies of 3-, 4-, and 5-node undirected motifs (also know as graphlets) is widely used for understanding complex networks such as social and biology networks. However, it is a great challenge to compute these metrics for a…

Social and Information Networks · Computer Science 2015-12-18 Pinghui Wang , Jing Tao , Junzhou Zhao , Xiaohong Guan

Topology identification and inference of processes evolving over graphs arise in timely applications involving brain, transportation, financial, power, as well as social and information networks. This chapter provides an overview of graph…

Signal Processing · Electrical Eng. & Systems 2025-12-12 Gonzalo Mateos , Yanning Shen , Georgios B. Giannakis , Ananthram Swami

Subgraph counting aims to count the number of occurrences of a subgraph T (aka as a template) in a given graph G. The basic problem has found applications in diverse domains. The problem is known to be computationally challenging - the…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-04-27 Langshi Chen , Bo Peng , Sabra Ossen , Anil Vullikanti , Madhav Marathe , Lei Jiang , Judy Qiu

We characterise all vertex-transitive finite connected graphs as essentially 5-connected or on a short list of explicit graph-classes. Our proof heavily uses Tutte-type canonical decompositions.

Combinatorics · Mathematics 2026-02-11 Jan Kurkofka , Tim Planken

In this paper we show how to efficiently produce unbiased estimates of subgraph frequencies from a probability sample of egocentric networks (i.e., focal nodes, their neighbors, and the induced subgraphs of ties among their neighbors). A…

Social and Information Networks · Computer Science 2015-10-29 Minas Gjoka , Emily Smith , Carter T. Butts

For every graph $X$, we consider the class of all connected $\{K_{1,3}, X\}$-free graphs which are distinct from an odd cycle and have independence number at least $4$, and we show that all graphs in the class are perfect if and only if $X$…

A vertex whose removal in a graph $G$ increases the number of components of $G$ is called a cut vertex. For all $n,c$, we determine the maximum number of connected induced subgraphs in a connected graph with order $n$ and $c$ cut vertices,…

Combinatorics · Mathematics 2019-10-11 Audace A. V. Dossou-Olory

The directions of an infinite graph $G$ are a tangle-like description of its ends: they are choice functions that choose compatibly for all finite vertex sets $X\subseteq V(G)$ a component of $G-X$. Although every direction is induced by a…

Combinatorics · Mathematics 2021-01-19 Jan Kurkofka , Ruben Melcher

We introduce a new model of indeterminacy in graphs: instead of specifying all the edges of the graph, the input contains all triples of vertices that form a connected subgraph. In general, different (labelled) graphs may have the same set…

Discrete Mathematics · Computer Science 2023-03-14 Paul Bastide , Linda Cook , Jeff Erickson , Carla Groenland , Marc van Kreveld , Isja Mannens , Jordi L. Vermeulen

The ability to control a complex network towards a desired behavior relies on our understanding of the complex nature of these social and technological networks. The existence of numerous control schemes in a network promotes us to wonder:…

Systems and Control · Computer Science 2016-12-01 Xizhe Zhang , Tianyang Lv , Yuanyuan Pu