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Recently, therapeutic peptides have demonstrated great promise for cancer treatment. To explore powerful anticancer peptides, artificial intelligence (AI)-based approaches have been developed to systematically screen potential candidates.…

Quantitative Methods · Quantitative Biology 2025-04-16 Joshua Zhi En Tan , JunJie Wee , Xue Gong , Kelin Xia

Unsupervised representation learning algorithms such as word2vec and ELMo improve the accuracy of many supervised NLP models, mainly because they can take advantage of large amounts of unlabeled text. However, the supervised models only…

Computation and Language · Computer Science 2018-09-25 Kevin Clark , Minh-Thang Luong , Christopher D. Manning , Quoc V. Le

This work investigates the ability of open Large Language Models (LLMs) to predict citation intent through in-context learning and fine-tuning. Unlike traditional approaches relying on domain-specific pre-trained models like SciBERT, we…

Computation and Language · Computer Science 2025-11-17 Paris Koloveas , Serafeim Chatzopoulos , Thanasis Vergoulis , Christos Tryfonopoulos

Despite the recent success on image classification, self-training has only achieved limited gains on structured prediction tasks such as neural machine translation (NMT). This is mainly due to the compositionality of the target space, where…

Computation and Language · Computer Science 2020-12-08 Minkai Xu , Mingxuan Wang , Zhouhan Lin , Hao Zhou , Weinan Zhang , Lei Li

With the emerging trend of GPT models, we have established a framework called AutoML-GPT that integrates a comprehensive set of tools and libraries. This framework grants users access to a wide range of data preprocessing techniques,…

Machine Learning · Computer Science 2023-09-06 Yun-Da Tsai , Yu-Che Tsai , Bo-Wei Huang , Chun-Pai Yang , Shou-De Lin

In many modern day systems such as information extraction and knowledge management agents, ontologies play a vital role in maintaining the concept hierarchies of the selected domain. However, ontology population has become a problematic…

Computation and Language · Computer Science 2019-06-07 Vindula Jayawardana , Dimuthu Lakmal , Nisansa de Silva , Amal Shehan Perera , Keet Sugathadasa , Buddhi Ayesha , Madhavi Perera

We argue that interpretations of machine learning (ML) models or the model-building process can be seen as a form of sensitivity analysis (SA), a general methodology used to explain complex systems in many fields such as environmental…

This paper investigates the potential of AI models, particularly large language models (LLMs), to support knowledge exploration and augment human creativity during ideation. We present "Latent Lab" an interactive tool for discovering…

Artificial Intelligence · Computer Science 2023-11-23 Kevin Dunnell , Trudy Painter , Andrew Stoddard , Andy Lippman

Machine learning (ML) is believed to be an effective and efficient tool to build reliable prediction model or extract useful structure from an avalanche of data. However, ML is also criticized by its difficulty in interpretation and…

Human-Computer Interaction · Computer Science 2016-10-19 Teng Lee , James Johnson , Steve Cheng

In this paper, we present the current position of the research project ML-Quadrat, which aims to extend the methodology, modeling language and tool support of ThingML - an open source modeling tool for IoT/CPS - to address Machine Learning…

Software Engineering · Computer Science 2021-06-29 Armin Moin , Stephan Rössler , Stephan Günnemann

Recent work on unsupervised question answering has shown that models can be trained with procedurally generated question-answer pairs and can achieve performance competitive with supervised methods. In this work, we consider the task of…

Computation and Language · Computer Science 2021-03-23 Pratyay Banerjee , Tejas Gokhale , Chitta Baral

The advancement of computer vision has pushed visual analysis tasks from still images to the video domain. In recent years, video instance segmentation, which aims to track and segment multiple objects in video frames, has drawn much…

Computer Vision and Pattern Recognition · Computer Science 2023-11-03 Yiming Cui , Cheng Han , Dongfang Liu

For languages with no annotated resources, transferring knowledge from rich-resource languages is an effective solution for named entity recognition (NER). While all existing methods directly transfer from source-learned model to a target…

Computation and Language · Computer Science 2020-07-16 Qianhui Wu , Zijia Lin , Guoxin Wang , Hui Chen , Börje F. Karlsson , Biqing Huang , Chin-Yew Lin

Cross-lingual Entity Linking (XEL) aims to ground entity mentions written in any language to an English Knowledge Base (KB), such as Wikipedia. XEL for most languages is challenging, owing to limited availability of resources as…

Computation and Language · Computer Science 2018-09-21 Shyam Upadhyay , Nitish Gupta , Dan Roth

We propose a Vision-Language Transformer (VLT) framework for referring segmentation to facilitate deep interactions among multi-modal information and enhance the holistic understanding to vision-language features. There are different ways…

Computer Vision and Pattern Recognition · Computer Science 2022-11-28 Henghui Ding , Chang Liu , Suchen Wang , Xudong Jiang

Lifelong learning aims to accumulate knowledge and alleviate catastrophic forgetting when learning tasks sequentially. However, existing lifelong language learning methods only focus on the supervised learning setting. Unlabeled data, which…

Computation and Language · Computer Science 2022-11-24 Yingxiu Zhao , Yinhe Zheng , Bowen Yu , Zhiliang Tian , Dongkyu Lee , Jian Sun , Haiyang Yu , Yongbin Li , Nevin L. Zhang

This work introduces MELA-TTS, a novel joint transformer-diffusion framework for end-to-end text-to-speech synthesis. By autoregressively generating continuous mel-spectrogram frames from linguistic and speaker conditions, our architecture…

Audio and Speech Processing · Electrical Eng. & Systems 2026-01-27 Keyu An , Zhiyu Zhang , Changfeng Gao , Yabin Li , Zhendong Peng , Haoxu Wang , Zhihao Du , Han Zhao , Zhifu Gao , Xiangang Li

Citation intention Classification (CIC) tools classify citations by their intention (e.g., background, motivation) and assist readers in evaluating the contribution of scientific literature. Prior research has shown that pretrained language…

Computation and Language · Computer Science 2024-10-18 Zeren Shui , Petros Karypis , Daniel S. Karls , Mingjian Wen , Saurav Manchanda , Ellad B. Tadmor , George Karypis

This study explores the application and performance of Transformational Machine Learning (TML) in drug discovery. TML, a meta learning algorithm, excels in exploiting common attributes across various domains, thus developing composite…

Biomolecules · Quantitative Biology 2023-10-02 Adnan Mahmud , Oghenejokpeme Orhobor , Ross D. King

This paper surveys research works in the quickly advancing field of instruction tuning (IT), which can also be referred to as supervised fine-tuning (SFT)\footnote{In this paper, unless specified otherwise, supervised fine-tuning (SFT) and…

Computation and Language · Computer Science 2025-10-07 Shengyu Zhang , Linfeng Dong , Xiaoya Li , Sen Zhang , Xiaofei Sun , Shuhe Wang , Jiwei Li , Runyi Hu , Tianwei Zhang , Fei Wu , Guoyin Wang