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The direpack package aims to establish a set of modern statistical dimension reduction techniques into the Python universe as a single, consistent package. The dimension reduction methods included resort into three categories: projection…

Computation · Statistics 2020-06-03 Emmanuel Jordy Menvouta , Sven Serneels , Tim Verdonck

We describe the Macaulay2 package TateOnProducts and its capabilities, which include computing cohomology tables and Beilinson monads of sheaves on products of projective spaces and the derived category pushForward of a sheaf under a…

Algebraic Geometry · Mathematics 2019-05-27 Daniel Erman , David Eisenbud , Frank-Olaf Schreyer

The INLA package provides a tool for computationally efficient Bayesian modeling and inference for various widely used models, more formally the class of latent Gaussian models. It is a non-sampling based framework which provides…

Methodology · Statistics 2019-07-26 Janet van Niekerk , Haakon Bakka , Haavard Rue , Olaf Schenk

Some results on the Cohen-Macaulayness of the canonical module. We study the $S_2$-fication of rings which are quotients by lattices ideals. Given a simplicial lattice ideal of codimension two $I,$ its Macaulayfication is given explicitly…

Commutative Algebra · Mathematics 2007-05-23 Marcel Morales

A linear constraint system is specified by linear equations over the group $\ZZ_d$ of integers modulo $d$. Their operator solutions play an important role in the study of quantum contextuality and non-local games. In this paper, we use the…

Algebraic Topology · Mathematics 2023-05-16 Ho Yiu Chung , Cihan Okay , Igor Sikora

This paper describes the generation of initial conditions for numerical simulations in cosmology with multiple levels of resolution, or multiscale simulations. We present the theory of adaptive mesh refinement of Gaussian random fields…

Astrophysics · Physics 2009-07-09 Edmund Bertschinger

We construct new geometric realizations of simplicial and pre-simplicial sets where the standard $n$-simplex, viewed as the space of probability measures on $n+1$ elements, is replaced by the space of $(n+1)$-valued random variables, with…

Algebraic Topology · Mathematics 2022-10-04 Ivan Marin

Physics increasingly uses Bayesian techniques for systematic data analysis and model-to-data comparison. This paper describes how these methods can be implemented to answer questions of relevance to teaching laboratories. It demonstrates…

Physics Education · Physics 2022-07-21 Matthew Heffernan

For a graph $G$, Bayer-Denker-Milutinovi\'c-Rowlands-Sundaram-Xue study in \cite{B-D-M-R-S-X} a new graph complex $\Delta_k^t(G)$, namely the simplicial complex with facets that are complements to independent sets of size $k$ in $G$. They…

Commutative Algebra · Mathematics 2023-11-07 Ralf Froberg

A stochastic algorithm is proposed, finding the set of generalized means associated to a probability measure on a compact Riemannian manifold M and a continuous cost function on the product of M by itself. Generalized means include p-means…

Probability · Mathematics 2013-05-28 Marc Arnaudon , Laurent Miclo

Local to global machinery plays an important role in the study of simplicial complexes, since the seminal work of Garland [G] to our days. In this work we develop a local to global machinery for general posets. We show that the high…

Combinatorics · Mathematics 2022-09-14 Tali Kaufman , Ran J. Tessler

Partially observed Markov process (POMP) models are powerful tools for time series modeling and analysis. Inherited the flexible framework of R package pomp, the is2 package extends some useful Monte Carlo statistical methodologies to…

Computation · Statistics 2018-11-08 Duc Anh Doan , Dao Nguyen , Xin Dang

Simplicial approximation provides a framework for constructing simplicial complexes that are homotopy equivalent to a given manifold, provided a CW structure is explicitly known. However, its conventional implementation quickly becomes…

Computational Geometry · Computer Science 2026-03-16 Raphaël Tinarrage

In this short note we give an elementary description of the linear part of the minimal free resolution of a Stanley-Reisner ring of a simplicial complex $\Delta$. Indeed, the differentials in the linear part are simply a compilation of…

Commutative Algebra · Mathematics 2019-07-09 Lukas Katthän

We present the first general purpose framework for marginal maximum a posteriori estimation of probabilistic program variables. By using a series of code transformations, the evidence of any probabilistic program, and therefore of any…

Machine Learning · Statistics 2017-07-17 Tom Rainforth , Tuan Anh Le , Jan-Willem van de Meent , Michael A. Osborne , Frank Wood

In this paper we present a short overview of the new Wolfram Mathematica package intended for elementary "in-basis" tensor and differential-geometric calculations. In contrast to alternatives our package is designed to be easy-to-use,…

Nuclear Theory · Physics 2021-11-15 D. O. Rybalka

We present a novel method of associating Euclidean features to simplicial complexes, providing a way to use them as input to statistical and machine learning tools. This method extends the node2vec algorithm to simplices of higher…

Machine Learning · Computer Science 2021-01-13 Celia Hacker

We study the minimal primary decomposition of completely $t$-spread lexsegment ideals via simplicial complexes. We determine some algebraic invariants of such a class of $t$-spread ideals. Hence, we classify all $t$-spread lexsegment ideals…

Commutative Algebra · Mathematics 2022-08-04 Marilena Crupi , Antonino Ficarra

We define nice partitions of the multicomplex associated to a Stanley ideal. As the main result we show that if the monomial ideal $I$ is a CM Stanley ideal, then $I^p$ is a Stanley ideal as well, where $I^p$ is the polarization of $I$.

Combinatorics · Mathematics 2009-11-12 Sarfraz Ahmad

We introduce denoiseR, an R package that provides a unified implementation of several state-of-the-art proposals for regularized low rank matrix estimation, along with automatic selection of the regularization parameters. We also extend…

Applications · Statistics 2018-08-09 Julie Josse , Sylvain Sardy , Stefan Wager