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In this paper we study long-term evolution of a finite system of locally interacting birth-and-death processes labelled by vertices of a finite connected graph. A detailed description of the asymptotic behaviour is obtained in the case of…

Probability · Mathematics 2015-06-19 Vadim Shcherbakov , Stanislav Volkov

Neutral speciation mechanisms based on isolation by distance and sexual selection, termed topopatric, have recently been shown to describe the observed patterns of abundance distributions and species-area relationships. Previous works have…

Populations and Evolution · Quantitative Biology 2012-10-24 Elizabeth M. Baptestini , Marcus A. M. de Aguiar , Yaneer Bar-Yam

We study a discrete-time random walk on the non-negative integers, such that when 0 is reached a jump occurs to an arbitrary location, with given probabilities. We obtain an asymptotic formula for the expected position at large times, in…

Probability · Mathematics 2011-09-01 Guy Katriel

The zero range process is of particular importance as a generic model for domain wall dynamics of one-dimensional systems far from equilibrium. We study this process in one dimension with rates which induce an effective attraction between…

Statistical Mechanics · Physics 2018-04-26 Stefan Grosskinsky , Gunter M. Schuetz , Herbert Spohn

We study a generalization of the classical contact process (SIS epidemic model) in a directed graph $G$. Our model is a continuous-time interacting particle system in which at every time, each vertex is either healthy or infected, and each…

Probability · Mathematics 2020-11-26 Shirshendu Chatterjee , David Sivakoff , Matthew Wascher

We propose an expression for the production of entropy for system described by a stochastic dynamics which is appropriate for the case where the reverse transition rate vanishes but the forward transition is nonzero. The expression is…

Statistical Mechanics · Physics 2024-08-22 Tânia Tome , Mário J. de Oliveira

The Susceptible-Infected-Recovered (SIR) model is the cornerstone of epidemiological models. However, this specification depends on two parameters only, which implies a lack of flexibility and the difficulty to replicate the volatile…

Populations and Evolution · Quantitative Biology 2020-11-17 Christian Gourieroux , Yang Lu

The role of a new form of dynamic interaction is explored in a network of generic identical oscillators. The proposed design of dynamic coupling facilitates the onset of a plethora of asymptotic states including synchronous states,…

Adaptation and Self-Organizing Systems · Physics 2021-01-12 Shiva Dixit , Sayantan Nag Chowdhury , Awadhesh Prasad , Dibakar Ghosh , Manish Dev Shrimali

Allelopathy refers to a type $0/-$ biological interaction that is neutral for a so-called inhibitory species but detrimental for a so-called susceptible species. To model this type of interaction in a spatially-structured environment,…

Probability · Mathematics 2023-05-29 Nicolas Lanchier , Max Mercer

We derive a self-duality relation for a one-dimensional model of branching and annihilating random walkers with an even number of offsprings. With the duality relation and by deriving exact results in some limiting cases involving fast…

Statistical Mechanics · Physics 2009-10-31 K. Mussawisade , J. E. Santos , G. M. Schütz , ;

Biological functions in living cells are controlled by protein interaction and genetic networks. These molecular networks should be dynamically stable against various fluctuations which are inevitable in the living world. In this paper, we…

Molecular Networks · Quantitative Biology 2009-11-13 Yuping Zhang , Minping Qian , Qi Ouyang , Minghua Deng , Fangting Li , Chao Tang

We study a non-local two species cross-interaction model with cross-diffusion. We propose a positivity preserving finite volume scheme based on the numerical method introduced in Ref. [15] and explore this new model numerically in terms of…

Analysis of PDEs · Mathematics 2017-05-10 J. A. Carrillo , Y. Huang , M. Schmidtchen

We apply the recently devised quasi-stationary simulation method to study the lifetime and order parameter of the contact process in the subcritical phase. This phase is not accessible to other methods because virtually all realizations of…

Statistical Mechanics · Physics 2007-05-23 Marcelo Martins de Oliveira , Ronald Dickman

We are interested in describing the infected size of the SIS Epidemic model using Birth-Death Markov process. The Susceptible-Infected-Susceptible (SIS) model is defined within a population of constant size $M$; the size is kept constant by…

Populations and Evolution · Quantitative Biology 2021-06-01 A. H. Nzokem

We demonstrate that scale-free patterns are observed in a spatially extended stochastic system whose deterministic part undergoes a saddle-node bifurcation. Remarkably, the scale-free patterns appear only at a particular time in relaxation…

Statistical Mechanics · Physics 2008-11-15 Mami Iwata , Shin-ichi Sasa

We exhibit a stochastic discrete time model that has exactly the Eigen model as its deterministic continuous limit. Such model can be divided into two phases: reproduction followed by neutral selection. This result suggests that Eigen model…

Populations and Evolution · Quantitative Biology 2011-02-03 Fabio Musso

Discrete-time models are the traditional approach for capturing population dynamics of a host-parasitoid system. Recent work has introduced a semi-discrete framework for obtaining model update functions that connect host-parasitoid…

Populations and Evolution · Quantitative Biology 2015-03-09 Brooks Emerick , Abhyudai Singh

We study several variants of the stochastic four-state rock-paper-scissors game or, equivalently, cyclic three-species predator-prey models with conserved total particle density, by means of Monte Carlo simulations on one- and…

Populations and Evolution · Quantitative Biology 2010-11-13 Qian He , Mauro Mobilia , Uwe C. Täuber

We study the contact process on a class of geometric random graphs with scale-free degree distribution, defined on a Poisson point process on $\mathbb{R}^d$. This class includes the age-dependent random connection model and the soft Boolean…

Probability · Mathematics 2024-04-19 Peter Gracar , Arne Grauer

We study the contact process in the regime of small infection rates on finite scale-free networks with stationary dynamics based on simultaneous updating of all connections of a vertex. We allow the update rates of individual vertices to…

Probability · Mathematics 2018-07-27 Emmanuel Jacob , Amitai Linker , Peter Mörters