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We introduce the notion of z-topological orderings for digraphs. We prove that given a digraph G on n vertices admitting a z-topological order- ing, together with such an ordering, one may count the number of subgraphs of G that at the same…
Dynamic graph theory is a novel, growing area that deals with graphs that change over time and is of great utility in modelling modern wireless, mobile and dynamic environments. As a graph evolves, possibly arbitrarily, it is challenging to…
Let $G$ be a digraph and $r(G)$ be its rank. Many interesting results on the rank of an undirected graph appear in the literature, but not much information about the rank of a digraph is available. In this article, we study the rank of a…
We generate new mathematical tools with which to quantify the macroscopic topological structure of large directed networks. This is achieved via a statistical mechanical analysis of constrained maximum entropy ensembles of directed random…
Thomas proved that every undirected graph admits a linked tree decomposition of width equal to its treewidth. In this paper, we generalize Thomas's theorem to digraphs. We prove that every digraph G admits a linked directed path…
Phylogenetic networks which are, as opposed to trees, suitable to describe processes like hybridization and horizontal gene transfer, play a substantial role in evolutionary research. However, while non-treelike events need to be taken into…
A vertex $w$ resolves two vertices $u$ and $v$ in a directed graph $G$ if the distance from $w$ to $u$ is different to the distance from $w$ to $v$. A set of vertices $R$ is a resolving set for a directed graph $G$ if for every pair of…
Phylogenetic networks are a type of directed acyclic graph that represent how a set $X$ of present-day species are descended from a common ancestor by processes of speciation and reticulate evolution. In the absence of reticulate evolution,…
We introduce the concept of shallow directed minors and based on this a new classification of classes of directed graphs which is diametric to existing directed graph decompositions and width measures proposed in the literature. We then…
Signs of hierarchy are prevalent in a wide range of systems in nature and society. One of the key problems is quantifying the importance of hierarchical organisation in the structure of the network representing the interactions or…
For an additive submonoid $\mathcal{M}$ of $\mathbb{R}_{\ge 0}$, the weight of an $\mathcal{M}$-labeled directed graph is the sum of all of its edge labels, while the content is the product of the labels. Having fixed $\mathcal{M}$ and a…
Arboreal networks are a generalization of rooted trees, defined by keeping the tree-like structure, but dropping the requirement for a single root. Just as the class of cographs is precisely the class of undirected graphs that can be…
To measure the tree-likeness of a directed acyclic graph (DAG), a new width parameter that considers the directions of the arcs was recently introduced: scanwidth. We present the first algorithm that efficiently computes the exact scanwidth…
We prove that for every set $S$ of vertices of a directed graph $D$, the maximum number of vertices in $S$ contained in a collection of vertex-disjoint cycles in $D$ is at least the minimum size of a set of vertices that hits all cycles…
We introduce the graph theoretical parameter of edge treewidth. This parameter occurs in a natural way as the tree-like analogue of cutwidth or, alternatively, as an edge-analogue of treewidth. We study the combinatorial properties of…
The graphical notion of effective resistance has found wide-ranging applications in many areas of pure mathematics, applied mathematics and control theory. By the nature of its construction, effective resistance can only be computed in…
Consider a drawing of a graph $G$ in the plane such that crossing edges are coloured differently. The minimum number of colours, taken over all drawings of $G$, is the classical graph parameter "thickness". By restricting the edges to be…
In recent years, there has been significant interest in characterizing the induced subgraph obstructions to bounded treewidth and pathwidth. While this has recently been resolved for pathwidth, the case of treewidth remains open, and prior…
Given a digraph, an ordering of its vertices defines a backedge graph, namely the undirected graph whose edges correspond to the arcs pointing backwards with respect to the order. The degreewidth of a digraph is the minimum over all…
In this paper, we propose a new type of graph, denoted as "embedded-graph", and its theory, which employs a distributed representation to describe the relations on the graph edges. Embedded-graphs can express linguistic and complicated…