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The Poisson--Boltzmann equation is widely used to model electrostatics in molecular systems. Available software packages solve it using finite difference, finite element, and boundary element methods, where the latter is attractive due to…

Computational Physics · Physics 2025-12-24 Michal Bosy , Matthew W. Scroggs , Timo Betcke , Erik Burman , Christopher D. Cooper

Effective properties of materials with random heterogeneous structures are typically determined by homogenising the mechanical quantity of interest in a window of observation. The entire problem setting encompasses the solution of a local…

Numerical Analysis · Mathematics 2021-10-22 Felipe Rocha , Simone Deparis , Pablo Antolin , Annalisa Buffa

A flexoelectric peridynamic (PD) theory is proposed. Using the PD framework, the formulation introduces, perhaps for the first time, a nanoscale flexoelectric coupling that entails non-uniform strain in centrosymmetric dielectrics. This…

Computational Physics · Physics 2016-03-15 Pranesh Roy , Debasish Roy

This paper presents a novel non-linear model reduction method: Probabilistic Manifold Decomposition (PMD), which provides a powerful framework for constructing non-intrusive reduced-order models (ROMs) by embedding a high-dimensional system…

Numerical Analysis · Mathematics 2026-01-09 Jiaming Guo , Dunhui Xiao

In numerical simulations of many charged systems at the micro/nano scale, a common theme is the repeated solution of the Poisson-Boltzmann equation. This task proves challenging, if not entirely infeasible, largely due to the nonlinearity…

Numerical Analysis · Mathematics 2018-08-29 Lijie Ji , Yanlai Chen , Zhenli Xu

The introduction of Physics-informed Neural Networks (PINNs) has led to an increased interest in deep neural networks as universal approximators of PDEs in the solid mechanics community. Recently, the Deep Energy Method (DEM) has been…

Computational Engineering, Finance, and Science · Computer Science 2022-01-26 Jan N. Fuhg , Nikolaos Bouklas

Elliptic partial differential equations (PDEs) with discontinuous diffusion coefficients occur in application domains such as diffusions through porous media, electro-magnetic field propagation on heterogeneous media, and diffusion…

Numerical Analysis · Mathematics 2015-01-20 Andrea Bonito , Ronald A. DeVore , Ricardo H. Nochetto

We present a one-dimensional high-order moving-mesh finite element method for moving boundary problems where the boundary velocity depends implicitly on the solution in the interior of the domain. The method employs a conservative arbitrary…

Numerical Analysis · Mathematics 2025-09-05 Matthew E Hubbard , Thomas J Radley

As model problem we consider the prototype for flow and transport of a concentration in porous media in an interior domain and couple it with a diffusion process in the corresponding unbounded exterior domain. To solve the problem we…

Numerical Analysis · Mathematics 2018-10-22 Christoph Erath , Günther Of , Francisco-Javier Sayas

Wide variety of engineering design tasks can be formulated as constrained optimization problems where the shape and topology of the domain are optimized to reduce costs while satisfying certain constraints. Several mathematical approaches…

Optimization and Control · Mathematics 2015-03-10 Igor Ostanin , Denis Zorin , Ivan Oseledets

We derive novel algorithms for optimization problems constrained by partial differential equations describing multiscale particle dynamics, including non-local integral terms representing interactions between particles. In particular, we…

Numerical Analysis · Mathematics 2021-09-09 Mildred Aduamoah , Benjamin D. Goddard , John W. Pearson , Jonna C. Roden

Partial differential equations (PDEs) play a fundamental role in modeling and simulating problems across a wide range of disciplines. Recent advances in deep learning have shown the great potential of physics-informed neural networks…

Machine Learning · Computer Science 2022-01-31 Pu Ren , Chengping Rao , Yang Liu , Jianxun Wang , Hao Sun

Micro-Electro-Mechanical Systems (MEMS) normally have fixed or moving structures with cross-sections of the order of microns ($\mu m$) and lengths of the order of tens or hundreds of microns. These structures are often plates or array of…

Computational Physics · Physics 2007-05-23 N. Majumdar , S. Mukhopadhyay

This paper presents an asymptotically compatible error bound for the finite element method (FEM) applied to a nonlocal diffusion model. The analysis covers two scenarios: meshes with and without shape regularity. For shape-regular meshes,…

Numerical Analysis · Mathematics 2025-06-06 Yanzun Meng , Zuoqiang Shi

The finite element method (FEM) and the boundary element method (BEM) can numerically solve the Helmholtz system for acoustic wave propagation. When an object with heterogeneous wave speed or density is embedded in an unbounded exterior…

Numerical Analysis · Mathematics 2021-11-29 Elwin van 't Wout

We introduce a new formulation for the finite element immersed boundary method which makes use of a distributed Lagrange multiplier. We prove that a full discretization of our model, based on a semi-implicit time advancing scheme, is…

Numerical Analysis · Mathematics 2015-03-05 Daniele Boffi , Nicola Cavallini , Lucia Gastaldi

We present a method of CutFEM type for the Poisson problem with either Dirichlet or Neumann boundary conditions. The computational mesh is obtained from a background (typically uniform Cartesian) mesh by retaining only the elements…

Numerical Analysis · Mathematics 2019-09-04 Alexei Lozinski

Understanding the flow of deformable particles such as liquid drops, synthetic capsules and vesicles, and biological cells confined in a small channel is essential to a wide range of potential chemical and biomedical engineering…

Fluid Dynamics · Physics 2020-11-18 J. M. Lyu , Paul G. Chen , G. Boedec , M. Leonetti , M. Jaeger

This study focuses on solving the numerical challenges of imposing absorbing boundary conditions for dynamic simulations in the material point method (MPM). To attenuate elastic waves leaving the computational domain, the current work…

Geophysics · Physics 2025-01-24 Jun Kurima , Bodhinanda Chandra , Kenichi Soga

We develop a cut finite element method (CutFEM) for convection-diffusion problems posed on mixed-dimensional domains, i.e., unions of manifolds of different dimensions arranged in a hierarchical structure where lower-dimensional components…

Numerical Analysis · Mathematics 2026-04-09 Erik Burman , Peter Hansbo , Mats G. Larson , Karl Larsson , Shantiram Mahata
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