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Simulations are performed of a small quantum system interacting with a quantum environment. The system consists of various initial states of two harmonic oscillators coupled to give normal modes. The environment is "designed" by its level…

Statistical Mechanics · Physics 2015-06-15 George L. Barnes , Michael E. Kellman

We develop a relativistic lattice Boltzmann (LB) model, providing a more accurate description of dissipative phenomena in relativistic hydrodynamics than previously available with existing LB schemes. The procedure applies to the…

Computational Physics · Physics 2015-06-12 M. Mendoza , I. Karlin , S. Succi , H. J. Herrmann

We investigate the quantum many-body dynamics of dissociation of a Bose-Einstein condensate of molecular dimers into pairs of constituent bosonic atoms and analyze the resulting atom-atom correlations. The quantum fields of both the…

Other Condensed Matter · Physics 2007-05-23 C. M. Savage , P. E. Schwenn , K. V. Kheruntsyan

Cross sections and rate coefficients for rovibronic excitation of the CH$^+$ ion by electron impact and dissociative recombination of CH$^+$ with electrons are evaluated using a theoretical approach combining an R-matrix method and…

Astrophysics of Galaxies · Physics 2025-11-25 Joshua Forer , Dávid Hvizdoš , Mehdi Ayouz , Chris H. Greene , Viatcheslav Kokoouline

A quantum model on the chemically and physically induced pluripotency in stem cells is proposed. Based on the conformational Hamiltonian and the idea of slow variables (molecular torsions) slaving fast ones the conversion from the…

Other Quantitative Biology · Quantitative Biology 2015-01-07 Liaofu Luo

Under many conditions, biomolecules and nanoparticles associate by means of attractive bonds, due to hydrophobic attraction. Extracting the microscopic association or dissociation rates from experimental data is complicated by the…

Soft Condensed Matter · Physics 2011-10-13 Alessio Zaccone , Jerome J. Crassous , Benjamin Béri , Matthias Ballauff

Brownian motion in a granular gas in a homogeneous cooling state is studied theoretically and by means of molecular dynamics. We use the simplest first-principle model for the impact-velocity dependent restitution coefficient, as it follows…

Statistical Mechanics · Physics 2015-06-11 Anna Bodrova , Awadhesh Kumar Dubey , Sanjay Puri , Nikolai Brilliantov

A basic model for the formation of non-equilibrium rotational energy distributions is described for reactive, homo-polar diatomic molecules and ions in the interstellar medium. Kinetic models were constructed to calculate the rotational…

Astrophysics of Galaxies · Physics 2015-06-12 Robert J. Glinski , Erik P. Hoy , Clark R. Downum

Coarse-graining of fully atomistic molecular dynamics simulations is a long-standing goal in order to allow the description of processes occurring on biologically relevant timescales. For example, the prediction of pathways, rates and…

Biological Physics · Physics 2020-06-12 Steffen Wolf , Benjamin Lickert , Simon Bray , Gerhard Stock

For the first time primary hot isotope distributions are experimentally reconstructed in intermediate heavy ion collisions and used with antisymmetrized molecular dynamics (AMD) calculations to determine density, temperature and symmetry…

Unlike macroscopic engines, the molecular machinery of living cells is strongly affected by fluctuations. Stochastic Thermodynamics uses Markovian jump processes to model the random transitions between the chemical and configurational…

Statistical Mechanics · Physics 2015-10-19 Bernhard Altaner , Artur Wachtel , Jürgen Vollmer

Model calculations that include the effects of irreversible, environmental couplings on top of a coupled-channels dynamical description of the collision of two complex nuclei are presented. The Liouville-von Neumann equation for the…

Nuclear Theory · Physics 2009-11-13 Alexis Diaz-Torres , David Hinde , Mahananda Dasgupta , Gerard Milburn , Jeff Tostevin

Kinetic-transport equations are, by now, standard models to describe the dynamics of populations of bacteria moving by run-and-tumble. Experimental observations show that bacteria increase their run duration when encountering an increasing…

Analysis of PDEs · Mathematics 2015-03-16 Benoît Perthame , Min Tang , Nicolas Vauchelet

In this work we introduce a new expression of the plasma Dielecronic Recombination (DR) rate as a function of the temperature, derived assuming a small deformation of the Maxwell-Boltzmann distribution and containing corrective factors, in…

Atomic Physics · Physics 2007-05-23 Fatima Bachari , Fabrizio Ferro , Giancarlo Maero , Piero Quarati

Machine learning has recently emerged as a powerful tool for generating new molecular and material structures. The success of state-of-the-art models stems from their ability to incorporate physical symmetries, such as translation,…

Machine Learning · Computer Science 2024-05-16 Bingqing Cheng

A one-dimensional reaction-diffusion model consisting of two species of particles and vacancies on a ring is introduced. The number of particles in one species is conserved while in the other species it can fluctuate because of creation and…

Statistical Mechanics · Physics 2009-11-13 F H Jafarpour , B Ghavami

Two kinetic models are proposed for high-temperature rarefied (or non-equilibrium) gas flows with radiation. One of the models uses the Boltzmann collision operator to model the translational motion of gas molecules, which has the ability…

Fluid Dynamics · Physics 2023-06-28 Qi Li , Jianan Zeng , Lei Wu

Kinetic equations are often appropriate to model the energy density of high frequency waves propagating in highly heterogeneous media. The limitations of the kinetic model are quantified by the statistical instability of the wave energy…

Mathematical Physics · Physics 2007-11-27 Guillaume Bal , Olivier Pinaud

We have constructed a unified framework for generalizing the finite-time thermodynamic behavior of statistically distinct bosonic and fermionic Stirling cycles with regenerative characteristics. In our formalism, working fluid consisting of…

Quantum Physics · Physics 2021-12-08 Nikhil Gupt , Srijan Bhattacharyya , Arnab Ghosh

We present an overview of the role of quantum coherence in influencing nonadiabatic processes in the condensed phase. Equations of motion for mixed quantum-classical dynamics are derived from the Consistent Histories interpretation of…

Chemical Physics · Physics 2008-02-03 Eric R. Bittner
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