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Weighted digraphs are used to model a variety of natural systems and can exhibit interesting structure across a range of scales. In order to understand and compare these systems, we require stable, interpretable, multiscale descriptors. To…
Persistent Homology is a fairly new branch of Computational Topology which combines geometry and topology for an effective shape description of use in Pattern Recognition. In particular it registers through "Betti Numbers" the presence of…
Sparse systems are usually parameterized by a tuning parameter that determines the sparsity of the system. How to choose the right tuning parameter is a fundamental and difficult problem in learning the sparse system. In this paper, by…
A general method for constructing simplicial complex from observed time series of dynamical systems based on the delay coordinate reconstruction procedure is presented. The obtained simplicial complex preserves all pertinent topological…
The ordering dynamics of the Higgs field is studied, using techniques inspired by the study of phase ordering in condensed matter physics, as a first step to understanding the evolution of cosmic structure through the formation of…
We use Topological Data Analysis tools for studying the inner organization of cells in segmented images of epithelial tissues. More specifically, for each segmented image, we compute different persistence barcodes, which codify lifetime of…
Topological data analysis is an emerging area in exploratory data analysis and data mining. Its main tool, persistent homology, has become a popular technique to study the structure of complex, high-dimensional data. In this paper, we…
Persistent Topology studies topological features of shapes by analyzing the lower level sets of suitable functions, called filtering functions, and encoding the arising information in a parameterized version of the Betti numbers, i.e. the…
One of the main objectives of topological data analysis is the study of discrete invariants for persistence modules, in particular when dealing with multiparameter persistence modules. In many cases, the invariants studied for these…
Deep learning models have achieved remarkable success across various domains, yet their learned representations and decision-making processes remain largely opaque and hard to interpret. This work introduces HOLE (Homological Observation of…
Using persistent homology to guide optimization has emerged as a novel application of topological data analysis. Existing methods treat persistence calculation as a black box and backpropagate gradients only onto the simplices involved in…
We introduce PH-STAT, a comprehensive MATLAB toolbox designed for performing a wide range of statistical inferences and machine learning tasks on persistent homology, primarily for network and graph data, with an emphasis on brain network…
Consider the space of continuous functions on a geometric tree $X$ whose persistent homology gives rise to a finite generic barcode $D$. We show that there are exactly as many path connected components in this space as there are merge trees…
Persistent homology is a method for computing the topological features present in a given data. Recently, there has been much interest in the integration of persistent homology as a computational step in neural networks or deep learning. In…
The machine learning technique of persistent homology classifies complex systems or datasets by computing their topological features over a range of characteristic scales. There is growing interest in applying persistent homology to…
The persistent homology transform (PHT) of a subset $M \subset \mathbb{R}^d$ is a map $\text{PHT}(M):\mathbb{S}^{d-1} \to \mathbf{Dgm}$ from the unit sphere to the space of persistence diagrams. This map assigns to each direction $v\in…
Topological Data Analysis (TDA) is a rising field of computational topology in which the topological structure of a data set can be observed by persistent homology. By considering a sequence of sublevel sets, one obtains a filtration that…
Complex systems are difficult to study not only because they are nonlinear, multiscale, and often nonstationary, but because their scientifically relevant organization is often invisible at the level of individual components, pairwise…
Structure in quantum entanglement entropy is often leveraged to focus on a small corner of the exponentially large Hilbert space and efficiently parameterize the problem of finding ground states. A typical example is the use of matrix…
We generalize the hidden symmetry-breaking picture of symmetry-protected topological (SPT) order developed by Kennedy and Tasaki in the context of the Haldane phase. Our generalization applies to a wide class of SPT phases in…