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Related papers: Modelling COVID-19 -- I A dynamic SIR(D) with appl…

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We consider the SEIRS compartment epidemiology model suitable for predicting the evolution of the COVID-19 pandemy in the extreme limiting case of no acquired immunity. The disease-free and endemic fixed points are found and their stability…

Populations and Evolution · Quantitative Biology 2020-12-15 J. M. Ilnytskyi

A nonlinear partial differential equation (PDE) based compartmental model of COVID-19 provides a continuous trace of infection over space and time. Finer resolutions in the spatial discretization, the inclusion of additional model…

Computational Engineering, Finance, and Science · Computer Science 2022-08-04 Sudhi P. V. , Victorita Dolean , Pierre Jolivet , Brandon Robinson , Jodi D. Edwards , Tetyana Kendzerska , Abhijit Sarkar

A physics-informed neural network (PINN) embedded with the susceptible-infected-removed (SIR) model is devised to understand the temporal evolution dynamics of infectious diseases. Firstly, the effectiveness of this approach is demonstrated…

Quantitative Methods · Quantitative Biology 2025-04-08 Shuai Han , Lukas Stelz , Horst Stoecker , Lingxiao Wang , Kai Zhou

Fitting Susceptible-Infected-Recovered (SIR) models to incidence data is problematic when not all infected individuals are reported. Assuming an underlying SIR model with general but known distribution for the time to recovery, this paper…

Populations and Evolution · Quantitative Biology 2021-08-16 Imelda Trejo , Nicolas Hengartner

In an earlier paper we proposed a recursive model for epidemics; in the present paper we generalize this model to include the asymptomatic or unrecorded symptomatic people, which we call {\em dark people} (dark sector). We call this the…

Populations and Evolution · Quantitative Biology 2021-03-01 Matthias Kreck , Erhard Scholz

The spread of COVID-19 has been greatly impacted by regulatory policies and behavior patterns that vary across counties, states, and countries. Population-level dynamics of COVID-19 can generally be described using a set of ordinary…

Applications · Statistics 2022-04-11 Joshua P. Keller , Tianjian Zhou , Andee Kaplan , G. Brooke Anderson , Wen Zhou

Susceptible-Exposed-Infectious-Recovered (SEIR) models with inter-individual variation in susceptibility or exposure to infection were proposed early in the COVID-19 pandemic as a potential element of the mathematical/statistical toolset…

Applications · Statistics 2025-10-28 Ibrahim Mohammed , Chris Robertson , M. Gabriela M. Gomes

COVID-19 pandemic has had a disruptive and irreversible impact globally, yet traditional epidemiological modeling approaches such as the susceptible-infected-recovered (SIR) model have exhibited limited effectiveness in forecasting of the…

Quantitative Methods · Quantitative Biology 2022-10-13 Jinhuan Ke , Jiahao Ma , Xiyu Yin , Robin Singh

The Covid-19 pandemic has made clear the need to improve modern multivariate time-series forecasting models. Current state of the art predictions of future daily deaths and, especially, hospital resource usage have confidence intervals that…

Populations and Evolution · Quantitative Biology 2020-06-25 Richard Bao , August Chen , Jethin Gowda , Shiva Mudide

A model of reactive social distancing in epidemics is proposed, in which the infection rate changes with the number infected. The final-size equation for the total number that the epidemic will infect can be derived analytically, as can the…

Populations and Evolution · Quantitative Biology 2020-03-19 Rose Baker

A plethora of prediction models of SARS-CoV-2 pandemic were proposed in the past. Prediction performances not only depend on the structure and features of the model, but also on its parametrization. Official databases are often biased due…

Populations and Evolution · Quantitative Biology 2021-09-27 Yuri Kheifetz , Holger Kirsten , Markus Scholz

This study develops a framework for quantification of the impact of changes in population mobility due to social distancing on the COVID-19 infection growth rate. Using the Susceptible-Infected-Recovered (SIR) epidemiological model we…

Populations and Evolution · Quantitative Biology 2020-06-05 Benjamin Seibold , Zivjena Vucetic , Slobodan Vucetic

We study the datafor the cumulative as well as daily number of cases in the Covid-19 outbreak in China. The cumulative data can be fit to an empirical form obtained from a Susceptible-Infected-Removed (SIR) model studied on an Euclidean…

Physics and Society · Physics 2020-03-17 Kathakali Biswas , Abdul Khaleque , Parongama Sen

Objectives. Public health officials need tools to assist with anticipating the healthcare resources required to confront the SARS-COV-2 pandemic. We built a modeling tool to aid practicing public health officials with estimating healthcare…

Populations and Evolution · Quantitative Biology 2020-05-14 Gabriel Rainisch , Eduardo A. Undurraga , Gerardo Chowell

The estimation of unknown parameters in simulations, also known as calibration, is crucial for practical management of epidemics and prediction of pandemic risk. A simple yet widely used approach is to estimate the parameters by minimizing…

Methodology · Statistics 2023-06-26 Chih-Li Sung , Ying Hung

Spatiotemporal modelling of infectious diseases such as COVID-19 involves using a variety of epidemiological metrics such as regional proportion of cases or regional positivity rates. Although observing their changes over time is critical…

The SIR model is one of the most prototypical compartmental models in epidemiology. Generalizing this ordinary differential equation (ODE) framework into a spatially distributed partial differential equation (PDE) model is a considerable…

Quantitative Methods · Quantitative Biology 2024-07-11 Su Yang , Weiqi Chu , Panayotis Kevrekidis

Authors Yi-Cheng Chen, Ping-En Lu, Cheng-Shang Chang, and Tzu-Hsuan Liu use the Finite Impulse Response (FIR) linear system filtering method to track and predict the number of people infected and recovered from COVID-19, in a pandemic…

Machine Learning · Statistics 2025-06-30 Felipe Rogério Pimentel , Rafael Gustavo Alves

Since December 2019, A novel coronavirus (2019-nCoV) has been breaking out in China, which can cause respiratory diseases and severe pneumonia. Mathematical and empirical models relying on the epidemic situation scale for forecasting…

Populations and Evolution · Quantitative Biology 2021-01-05 Jingyuan Wang , Xin Lin , Yuxi Liu , Qilegeri , Kai Feng , Hui Lin

We propose a simple SIR model in order to investigate the impact of various confinement strategies on a most virulent epidemic. Our approach is motivated by the current COVID-19 pandemic. The main hypothesis is the existence of two…

Populations and Evolution · Quantitative Biology 2020-12-30 G. Nakamura , B. Grammaticos , M. Badoual