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Electronic Health Records (EHRs) play an important role in the healthcare system. However, their complexity and vast volume pose significant challenges to data interpretation and analysis. Recent advancements in Artificial Intelligence…

While electronic health records (EHRs) are widely used across various applications in healthcare, most applications use the EHRs in their raw (tabular) format. Relying on raw or simple data pre-processing can greatly limit the performance…

Machine Learning · Computer Science 2024-03-28 Fahmida Liza Piya , Mehak Gupta , Rahmatollah Beheshti

Joint entity and relation extraction is an essential task in natural language processing and knowledge graph construction. Existing approaches usually decompose the joint extraction task into several basic modules or processing steps to…

Computation and Language · Computer Science 2022-03-18 Yu-Ming Shang , Heyan Huang , Xian-Ling Mao

The presence of detailed clinical information in electronic health record (EHR) systems presents promising prospects for enhancing patient care through automated retrieval techniques. Nevertheless, it is widely acknowledged that accessing…

Information Retrieval · Computer Science 2024-09-13 Abderrahim Oussama Batouche , Eugen Czeizler , Miika Koskinen , Tuomas Mirtti , Antti Sakari Rannikko

Motivated by the fact that many relations cross the sentence boundary, there has been increasing interest in document-level relation extraction (DocRE). DocRE requires integrating information within and across sentences, capturing complex…

Computation and Language · Computer Science 2022-04-12 John Giorgi , Gary D. Bader , Bo Wang

Relation extraction (RE) seeks to detect and classify semantic relationships between entities, which provides useful information for many NLP applications. Since the state-of-the-art RE models require large amounts of manually annotated…

Computation and Language · Computer Science 2019-11-13 Jian Ni , Radu Florian

Entity and relation extraction is a key task in information extraction, where the output can be used for downstream NLP tasks. Existing approaches for entity and relation extraction tasks mainly focus on the English corpora and ignore other…

Computation and Language · Computer Science 2023-01-12 Zixiang Wang , Jian Yang , Tongliang Li , Jiaheng Liu , Ying Mo , Jiaqi Bai , Longtao He , Zhoujun Li

Despite the growing availability of Electronic Health Record (EHR) data, researchers often face substantial barriers in effectively using these data for translational research due to their complexity, heterogeneity, and lack of standardized…

We present a comprehensive analysis of deep learning approaches for Electronic Health Record (EHR) time-series imputation, examining how architectural and framework biases combine to influence model performance. Our investigation reveals…

Machine Learning · Computer Science 2025-02-05 Linglong Qian , Tao Wang , Jun Wang , Hugh Logan Ellis , Robin Mitra , Richard Dobson , Zina Ibrahim

Document-level relation extraction is a complex human process that requires logical inference to extract relationships between named entities in text. Existing approaches use graph-based neural models with words as nodes and edges as…

Computation and Language · Computer Science 2019-09-04 Fenia Christopoulou , Makoto Miwa , Sophia Ananiadou

Electronic health records (EHR) are widely believed to hold a profusion of actionable insights, encrypted in an irregular, semi-structured format, amidst a loud noise background. To simplify learning patterns of health and disease, medical…

Computation and Language · Computer Science 2022-12-13 David A. Bloore , Romane Gauriau , Anna L. Decker , Jacob Oppenheim

Clinical texts, represented in electronic medical records (EMRs), contain rich medical information and are essential for disease prediction, personalised information recommendation, clinical decision support, and medication pattern mining…

Computation and Language · Computer Science 2023-10-10 Hangyu Tu , Lifeng Han , Goran Nenadic

The use of Electronic Health Records (EHRs) has increased dramatically in the past 15 years, as, it is considered an important source of managing data od patients. The EHRs are primary sources of disease diagnosis and demographic data of…

Machine Learning · Computer Science 2024-04-02 Bushra F. Alsaqer , Alaa F. Alsaqer , Amna Asif

Electronic Health Records (EHRs) are relational databases that store the entire medical histories of patients within hospitals. They record numerous aspects of patients' medical care, from hospital admission and diagnosis to treatment and…

Computation and Language · Computer Science 2024-05-24 Gyubok Lee , Sunjun Kweon , Seongsu Bae , Edward Choi

Relation extraction is a fundamental problem in natural language processing. Most existing models are defined for relation extraction in the general domain. However, their performance on specific domains (e.g., biomedicine) is yet unclear.…

Computation and Language · Computer Science 2021-12-14 Yongkang Li

Extracting information from full documents is an important problem in many domains, but most previous work focus on identifying relationships within a sentence or a paragraph. It is challenging to create a large-scale information extraction…

Computation and Language · Computer Science 2020-05-04 Sarthak Jain , Madeleine van Zuylen , Hannaneh Hajishirzi , Iz Beltagy

Distant supervised relation extraction is an efficient approach to scale relation extraction to very large corpora, and has been widely used to find novel relational facts from plain text. Recent studies on neural relation extraction have…

Computation and Language · Computer Science 2018-01-12 Zhengqiu He , Wenliang Chen , Zhenghua Li , Meishan Zhang , Wei Zhang , Min Zhang

Document-level relation extraction (DocRE) aims to extract relations of all entity pairs in a document. A key challenge in DocRE is the cost of annotating such data which requires intensive human effort. Thus, we investigate the case of…

Computation and Language · Computer Science 2023-10-13 Minseok Choi , Hyesu Lim , Jaegul Choo

Relation extraction (RE) is a well-known NLP application often treated as a sentence- or document-level task. However, a handful of recent efforts explore it across documents or in the cross-document setting (CrossDocRE). This is distinct…

Computation and Language · Computer Science 2024-06-19 Monika Jain , Raghava Mutharaju , Kuldeep Singh , Ramakanth Kavuluru

Large Language Models have undoubtedly revolutionized the Natural Language Processing field, the current trend being to promote one-model-for-all tasks (sentiment analysis, translation, etc.). However, the statistical mechanisms at work in…

Computation and Language · Computer Science 2024-08-26 Célia D'Cruz , Jean-Marc Bereder , Frédéric Precioso , Michel Riveill
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