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We analyze the existence, linear stability, and slow dynamics of localized 1D spike patterns for a Keller--Segel model of chemotaxis that includes the effect of logistic growth of the cellular population. Our analysis of localized patterns…

Analysis of PDEs · Mathematics 2023-08-01 Fanze Kong , Michael Ward , Juncheng Wei

We introduce a new class of parametricization structure-preserving partitioned Runge-Kutta ($\alpha$-PRK) methods for Hamiltonian systems with holonomic constraints. When the scalar parameter $\alpha=0$, the methods are reduced to the usual…

Numerical Analysis · Mathematics 2020-07-14 Lei Li , Dongling Wang

A non-Hermitian PT-symmetric version of the kicked top is introduced to study the interplay of quantum chaos with balanced loss and gain. The classical dynamics arising from the quantum dynamics of the angular momentum expectation values…

Quantum Physics · Physics 2021-01-15 Steve Mudute-Ndumbe , Eva-Maria Graefe

Robustness of biochemical systems has become one of the central questions in Systems Biology, although it is notoriously difficult to formally capture its multifaceted nature. Maintenance of normal system function depends not only on the…

Molecular Networks · Quantitative Biology 2012-03-28 Jost Neigenfind , Sergio Grimbs , Zoran Nikoloski

This paper focuses on the dynamical properties of delayed complex balanced systems. We first study the relationship between the stoichiometric compatibility classes of delayed and non-delayed systems. Using this relation we give another way…

Dynamical Systems · Mathematics 2024-03-14 Xiaoyu Zhang , Tian Zhang , Chuanhou Gao

Chemical reaction networks with generalized mass-action kinetics lead to power-law dynamical systems. As a simple example, we consider the Lotka reactions and the resulting planar ODE. We characterize the parameters (positive coefficients…

Dynamical Systems · Mathematics 2022-09-14 Balázs Boros , Josef Hofbauer , Georg Regensburger , Stefan Müller

Many reaction networks arising in applications are multistationary, that is, they have the capacity for more than one steady state; while some networks exhibit absolute concentration robustness (ACR), which means that some species…

Dynamical Systems · Mathematics 2024-11-20 Nidhi Kaihnsa , Tung Nguyen , Anne Shiu

The theory of chemical kinetics form the basis to describe the dynamics of chemical systems. Owing to physical and thermodynamic constraints, chemical reaction systems possess various structures, which can be utilized to characterize…

Biological Physics · Physics 2022-01-03 Tetsuya J. Kobayashi , Dimitri Loutchko , Atsushi Kamimura , Yuki Sughiyama

We develop a hierarchy of approximations to the master equation for systems that exhibit translational invariance and finite-range spatial correlation. Each approximation within the hierarchy is a set of ordinary differential equations that…

Chemical Physics · Physics 2015-11-03 Gregory Herschlag , Sorin Mitran , Guang Lin

The standard two-step model of homogeneous-catalyzed reactions had been theoretically analyzed at various levels of approximations from time to time. The primary aim was to check the validity of the quasi-steady-state approximation, and…

Chemical Physics · Physics 2019-11-14 Kamal Bhattacharyya , Sharmistha Dhatt

We consider the internal structure and the physical properties of specific classes of neutron, quark and Bose-Einstein Condensate stars in the hybrid metric-Palatini gravity theory, which is a combination of the metric and Palatini $f(R)$…

General Relativity and Quantum Cosmology · Physics 2017-02-24 Bogdan Danila , Tiberiu Harko , Francisco S. N. Lobo , M. K. Mak

This PhD Thesis is devoted to the study of the emergence of attractors, universality and collectivity in ultra-relativistic collisions by means of relativistic kinetic theory. After an introduction about Quantum Chromodynamics (QCD),…

High Energy Physics - Phenomenology · Physics 2026-02-10 Vincenzo Nugara

We develop a combined hydro-kinetic approach which incorporates a hydrodynamical expansion of the systems formed in \textit{A}+\textit{A} collisions and their dynamical decoupling described by escape probabilities. The method corresponds to…

Nuclear Theory · Physics 2008-11-26 S. V. Akkelin , Y. Hama , Iu. A. Karpenko , Yu. M. Sinyukov

Recently, the steady states of non-unitary free fermion dynamics are found to exhibit novel critical phases with power-law squared correlations and a logarithmic subsystem entanglement. In this work, we theoretically understand the…

Strongly Correlated Electrons · Physics 2021-11-17 Pengfei Zhang , Shao-Kai Jian , Chunxiao Liu , Xiao Chen

Quantum kinetic theory is an important tool for studying non-equilibrium, non-perturbative and non-linear interactions within an open quantum system, and as such is able to provide an unprecedented view on particle production in the…

High Energy Physics - Phenomenology · Physics 2025-08-12 James P. Edwards , Naser Ahmadiniaz , Sebastian M. Schmidt , Christian Kohlfürst

The kinetic description of relativistic plasmas in the presence of time-varying and spatially non-uniform electromagnetic fields is a fundamental theoretical issue both in astrophysics and plasma physics. This refers, in particular, to the…

High Energy Astrophysical Phenomena · Physics 2023-06-21 Claudio Cremaschini , Massimo Tessarotto , Zdeněk Stuchlík

A statistical approach to a self-consistent description of kinetic and hydrodynamic processes in systems of interacting particles is formulated on the basis of the nonequilibrium statistical operator method by D.N.Zubarev. It is shown how…

Statistical Mechanics · Physics 2007-05-23 M. V. Tokarchuk , I. P. Omelyan , A. E. Kobryn

A rescaled Manning potential is obtained in the analysis of scatterings of small- amplitude excitations with a kink defect. The generic model is a nonlinear Klein- Gordon Hamiltonian describing a one-dimensional chain of identical…

Chemical Physics · Physics 2025-10-23 Alain M. Dikande

A dynamical system obtains a wide variety of kinetic realizations, which is advantageous for the analysis of biochemical systems. A reaction network, derived from a dynamical system, may or may not possess some properties needed for a…

Molecular Networks · Quantitative Biology 2024-05-01 Dylan Antonio Talabis , Eduardo Mendoza

We present a numerical study of the non-equilibrium dynamics of the Sherrington-Kirkpatrick model. We analize the overlap distribution between the configurations visited at the time t and in particular its scaling behaviour with the size of…

Condensed Matter · Physics 2007-05-23 Andrea Baldassarri