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We show that, for all reasonable functions $T(n)=o(n\log n)$, we can algorithmically verify whether a given one-tape Turing machine runs in time at most $T(n)$. This is a tight bound on the order of growth for the function $T$ because we…

Logic in Computer Science · Computer Science 2019-01-15 David Gajser

The problem of finding a center string that is `close' to every given string arises and has many applications in computational biology and coding theory. This problem has two versions: the Closest String problem and the Closest Substring…

Computational Engineering, Finance, and Science · Computer Science 2007-05-23 Ming Li , Bin Ma , Lusheng Wang

Given a text $T$ of length $n$ and a pattern $P$ of length $m$, the string matching problem is a task to find all occurrences of $P$ in $T$. In this study, we propose an algorithm that solves this problem in $O((n + m)q)$ time considering…

Data Structures and Algorithms · Computer Science 2020-04-14 Satoshi Kobayashi , Diptarama Hendrian , Ryo Yoshinaka , Ayumi Shinohara

Many problems in Computer Science can be abstracted to the following question: given a set of objects and rules respectively, which new objects can be produced? In the paper, we consider a succinct version of the question: given a set of…

Data Structures and Algorithms · Computer Science 2012-01-04 Tian-Ming Bu , Chen Yuan , Peng Zhang

In this paper we study a variant of string pattern matching which deals with tuples of strings known as \textit{multi-track strings}. Multi-track strings are a generalisation of strings (or \textit{single-track strings}) that have primarily…

Data Structures and Algorithms · Computer Science 2019-12-02 Carl Barton , Ewan Birney , Tomas Fitzgerald

In this paper we analyze the notion of "stopping time complexity", informally defined as the amount of information needed to specify when to stop while reading an infinite sequence. This notion was introduced by Vovk and Pavlovic (2016). It…

Computational Complexity · Computer Science 2017-10-04 Mikhail Andreev , Gleb Posobin , Alexander Shen

While model checking PCTL for Markov chains is decidable in polynomial-time, the decidability of PCTL satisfiability, as well as its finite model property, are long standing open problems. While general satisfiability is an intriguing…

Logic in Computer Science · Computer Science 2015-03-20 Nathalie Bertrand , John Fearnley , Sven Schewe

Satisfiability of Boolean circuits is among the most known and important problems in theoretical computer science. This problem is NP-complete in general but becomes polynomial time when restricted either to monotone gates or linear gates.…

Computational Complexity · Computer Science 2017-10-24 Paweł M. Idziak , Jacek Krzaczkowski

Given a pattern string $P$ of length $n$ and a query string $T$ of length $m$, where the characters of $P$ and $T$ are drawn from an alphabet of size $\Delta$, the {\em exact string matching} problem consists of finding all occurrences of…

Data Structures and Algorithms · Computer Science 2015-10-01 Srikrishnan Divakaran

Quantum computation represents a computational paradigm whose distinctive attributes confer the ability to devise algorithms with asymptotic performance levels significantly superior to those achievable via classical computation. Recent…

Data Structures and Algorithms · Computer Science 2023-08-24 Domenico Cantone , Simone Faro , Arianna Pavone , Caterina Viola

In this paper, we consider two versions of the Text Assembling problem. We are given a sequence of strings $s^1,\dots,s^n$ of total length $L$ that is a dictionary, and a string $t$ of length $m$ that is texts. The first version of the…

Quantum Physics · Physics 2024-04-05 Kamil Khadiev , Carlos Manuel Bosch Machado , Zeyu Chen , Junde Wu

In the Manhattan Sequence Consensus problem (MSC problem) we are given $k$ integer sequences, each of length $l$, and we are to find an integer sequence $x$ of length $l$ (called a consensus sequence), such that the maximum Manhattan…

Data Structures and Algorithms · Computer Science 2014-07-24 Tomasz Kociumaka , Jakub W. Pachocki , Jakub Radoszewski , Wojciech Rytter , Tomasz Waleń

Many consensus string problems are based on Hamming distance. We replace Hamming distance by the more flexible (e.g., easily coping with different input string lengths) dynamic time warping distance, best known from applications in time…

Discrete Mathematics · Computer Science 2020-02-05 Nathan Schaar , Vincent Froese , Rolf Niedermeier

We report (to our knowledge) the first evaluation of Constraint Satisfaction as a computational framework for solving closest string problems. We show that careful consideration of symbol occurrences can provide search heuristics that…

Artificial Intelligence · Computer Science 2010-05-04 Tom Kelsey , Lars Kotthoff

We establish a lower bound for deciding the satisfiability of the conjunction of any two Boolean formulas from a set called a full representation of Boolean functions of $n$ variables - a set containing a Boolean formula to represent each…

Computational Complexity · Computer Science 2014-06-24 Samuel C. Hsieh

The Binary Jumbled String Matching problem is defined as: Given a string $s$ over $\{a,b\}$ of length $n$ and a query $(x,y)$, with $x,y$ non-negative integers, decide whether $s$ has a substring $t$ with exactly $x$ $a$'s and $y$ $b$'s.…

Data Structures and Algorithms · Computer Science 2013-06-03 Golnaz Badkobeh , Gabriele Fici , Steve Kroon , Zsuzsanna Lipták

A long-standing open question in Integer Programming is whether integer programs with constraint matrices with bounded subdeterminants are efficiently solvable. An important special case thereof are congruency-constrained integer programs…

Optimization and Control · Mathematics 2023-04-26 Martin Nägele , Richard Santiago , Rico Zenklusen

The combination of uninterpreted function symbols and universal quantification occurs in many applications of automated reasoning, for example, due to their ability to reason about arrays. Yet the satisfiability of such formulas is, in…

Logic in Computer Science · Computer Science 2026-02-19 Stefan Ratschan , Anggha Nugraha , Mikoláš Janota , Marek Dančo

Is there any hope for quantum computing to challenge the Turing barrier, i.e. to solve an undecidable problem, to compute an uncomputable function? According to Feynman's '82 argument, the answer is {\it negative}. This paper re-opens the…

Quantum Physics · Physics 2007-05-23 Cristian S. Calude , Boris Pavlov

Unambiguous automata are nondeterministic automata in which every word has at most one accepting run. In this paper we give a polynomial-time algorithm for model checking discrete-time Markov chains against \omega-regular specifications…

Logic in Computer Science · Computer Science 2023-04-10 Christel Baier , Stefan Kiefer , Joachim Klein , David Müller , James Worrell