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The search for similar genetic sequences is one of the main bioinformatics tasks. The genetic sequences data banks are growing exponentially and the searching techniques that use linear time are not capable to do the search in the required…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-07-13 Felipe Albrecht

Sorting is a primitive operation that is a building block for countless algorithms. As such, it is important to design sorting algorithms that approach peak performance on a range of hardware architectures. Graphics Processing Units (GPUs)…

Data Structures and Algorithms · Computer Science 2017-03-31 Henri Casanova , John Iacono , Ben Karsin , Nodari Sitchinava , Volker Weichert

Betweenness centrality is one of the most popular vertex centrality measures in network analysis. Hence, many (sequential and parallel) algorithms to compute or approximate betweenness have been devised. Recent algorithmic advances have…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-10-25 Alexander van der Grinten , Henning Meyerhenke

This note recapitulates an algorithmic observation for ordered Depth-First Search (DFS) in directed graphs that immediately leads to a parallel algorithm with linear speed-up for a range of processors for non-sparse graphs. The note extends…

Data Structures and Algorithms · Computer Science 2013-11-13 Jesper Larsson Träff

Vector search plays a crucial role in many real-world applications. In addition to single-vector search, multi-vector search becomes important for multi-modal and multi-feature scenarios today. In a multi-vector database, each row is an…

Databases · Computer Science 2026-05-05 Jiongli Zhu , Yue Wang , Bailu Ding , Philip A. Bernstein , Vivek Narasayya , Surajit Chaudhuri

We present sorting algorithms that represent the fastest known techniques for a wide range of input sizes, input distributions, data types, and machines. A part of the speed advantage is due to the feature to work in-place. Previously, the…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-02-05 Michael Axtmann , Sascha Witt , Daniel Ferizovic , Peter Sanders

Modern large-scale scientific applications consist of thousands to millions of individual tasks. These tasks involve not only computation but also communication with one another. Typically, the communication pattern between tasks is sparse…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-04-03 Christian Schulz , Henning Woydt

Two emerging hardware trends will dominate the database system technology in the near future: increasing main memory capacities of several TB per server and massively parallel multi-core processing. Many algorithmic and control techniques…

Databases · Computer Science 2012-07-03 Martina-Cezara Albutiu , Alfons Kemper , Thomas Neumann

Entity matching is an important and difficult step for integrating web data. To reduce the typically high execution time for matching we investigate how we can perform entity matching in parallel on a distributed infrastructure. We propose…

Distributed, Parallel, and Cluster Computing · Computer Science 2010-06-29 Toralf Kirsten , Lars Kolb , Michael Hartung , Anika Groß , Hanna Köpcke , Erhard Rahm

Performance optimization is the art of continuous seeking a harmonious mapping between the application domain and hardware. Recent years have witnessed a surge of deep learning (DL) applications in industry. Conventional wisdom for…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-11-27 Guoping Long , Jun Yang , Wei Lin

Nearest Neighbor Search (NNS) has recently drawn a rapid increase of interest due to its core role in managing high-dimensional vector data in data science and AI applications. The interest is fueled by the success of neural embedding,…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-02-01 Zhen Peng , Minjia Zhang , Kai Li , Ruoming Jin , Bin Ren

This work proposes a computing model to reduce the workload of CPU. It relies on the data intensive computation in memory, where the data reside, and effectively realizes an in-memory computing (IMC) platform. Each memory word, with…

Formal Languages and Automata Theory · Computer Science 2025-06-25 Subrata Paul , Sukanta Das , Biplab K Sikdar

AI Memory, specifically how models organizes and retrieves historical messages, becomes increasingly valuable to Large Language Models (LLMs), yet existing methods (RAG and Graph-RAG) primarily retrieve memory through similarity-based…

Computation and Language · Computer Science 2026-04-13 Zihao Tang , Xin Yu , Ziyu Xiao , Zengxuan Wen , Zelin Li , Jiaxi Zhou , Hualei Wang , Haohua Wang , Haizhen Huang , Weiwei Deng , Feng Sun , Qi Zhang

Multidimensional data are becoming more prevalent, partly due to the rise of the Internet of Things (IoT), and with that the need to ingest and analyze data streams at rates higher than before. Some industrial IoT applications require…

Databases · Computer Science 2017-07-05 Juan A. Colmenares , Reza Dorrigiv , Daniel G. Waddington

Private information retrieval (PIR) is a cryptographic primitive that allows a client to securely query one or multiple servers without revealing their specific interests. In spite of their strong security guarantees, current PIR…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-10-14 Mpoki Mwaisela , Peterson Yuhala , Pascal Felber , Valerio Schiavoni

Recursive query processing has experienced a recent resurgence, as a result of its use in many modern application domains, including data integration, graph analytics, security, program analysis, networking and decision making. Due to the…

Databases · Computer Science 2018-12-11 Zhiwei Fan , Jianqiao Zhu , Zuyu Zhang , Aws Albarghouthi , Paraschos Koutris , Jignesh Patel

Expanding Deep Learning applications toward edge computing demands architectures capable of delivering high computational performance and efficiency while adhering to tight power and memory constraints. Digital In-Memory Computing (DIMC)…

Hardware Architecture · Computer Science 2026-02-03 Tommaso Spagnolo , Cristina Silvano , Riccardo Massa , Filippo Grillotti , Thomas Boesch , Giuseppe Desoli

The tremendous expanse of search engines, dictionary and thesaurus storage, and other text mining applications, combined with the popularity of readily available scanning devices and optical character recognition tools, has necessitated…

Databases · Computer Science 2012-07-04 Sourav Dutta , Arnab Bhattacharya

The self-join finds all objects in a dataset that are within a search distance, epsilon, of each other; therefore, the self-join is a building block of many algorithms. We advance a GPU-accelerated self-join algorithm targeted towards high…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-09-27 Michael Gowanlock , Ben Karsin

We present four high performance hybrid sorting methods developed for various parallel platforms: shared memory multiprocessors, distributed multiprocessors, and clusters taking advantage of existence of both shared and distributed memory.…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-03-04 Thoria Alghamdi , Gita Alaghband
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