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High-quality data is crucial for the success of machine learning, but labeling large datasets is often a time-consuming and costly process. While semi-supervised learning can help mitigate the need for labeled data, label quality remains an…

Computer Vision and Pattern Recognition · Computer Science 2023-05-23 Lars Schmarje , Vasco Grossmann , Tim Michels , Jakob Nazarenus , Monty Santarossa , Claudius Zelenka , Reinhard Koch

Human annotation cost and time remain significant bottlenecks in Natural Language Processing (NLP), with test data annotation being particularly expensive due to the stringent requirement for low-error and high-quality labels necessary for…

Computation and Language · Computer Science 2026-03-24 Antonio Purificato , Maria Sofia Bucarelli , Andrea Bacciu , Amin Mantrach , Fabrizio Silvestri

Predicting diagnoses from Electronic Health Records (EHRs) is an important medical application of multi-label learning. We propose a convolutional residual model for multi-label classification from doctor notes in EHR data. A given patient…

Machine Learning · Statistics 2018-08-10 Xinyuan Zhang , Ricardo Henao , Zhe Gan , Yitong Li , Lawrence Carin

Named Entity Recognition (NER) from speech is among Spoken Language Understanding (SLU) tasks, aiming to extract semantic information from the speech signal. NER from speech is usually made through a two-step pipeline that consists of (1)…

Computation and Language · Computer Science 2022-02-18 Boli Chen , Guangwei Xu , Xiaobin Wang , Pengjun Xie , Meishan Zhang , Fei Huang

We propose a novel Active Learning framework capable to train effectively a convolutional neural network for semantic segmentation of medical imaging, with a limited amount of training labeled data. Our contribution is a practical…

Computer Vision and Pattern Recognition · Computer Science 2017-11-29 Marc Gorriz , Axel Carlier , Emmanuel Faure , Xavier Giro-i-Nieto

The detection of cardiac abnormalities using electrocardiogram (ECG) signals is crucial for early diagnosis and intervention in cardiovascular diseases. Traditional deep learning models often lack adaptability to varying signal patterns.…

Signal Processing · Electrical Eng. & Systems 2025-03-28 Sowad Rahman

In this study, we benchmark query strategies for deep actice learning~(DAL). DAL reduces annotation costs by annotating only high-quality samples selected by query strategies. Existing research has two main problems, that the experimental…

Computer Vision and Pattern Recognition · Computer Science 2023-12-12 Shiryu Ueno , Yusei Yamada , Shunsuke Nakatsuka , Kunihito Kato

Cell detection in histopathology images is of great value in clinical practice. \textit{Convolutional neural networks} (CNNs) have been applied to cell detection to improve the detection accuracy, where cell annotations are required for…

Computer Vision and Pattern Recognition · Computer Science 2021-07-01 Zipei Zhao , Fengqian Pang , Zhiwen Liu , Chuyang Ye

Named entity recognition (NER) is the very first step in the linguistic processing of any new domain. It is currently a common process in BioNLP on English clinical text. However, it is still in its infancy in other major languages, as it…

Computation and Language · Computer Science 2019-12-20 Fernando Sánchez León , Ana González Ledesma

Identifying named entities such as a person, location or organization, in documents can highlight key information to readers. Training Named Entity Recognition (NER) models requires an annotated data set, which can be a time-consuming…

Computation and Language · Computer Science 2022-12-20 Ting Wai Terence Au , Ingemar J. Cox , Vasileios Lampos

Diagnostic or procedural coding of clinical notes aims to derive a coded summary of disease-related information about patients. Such coding is usually done manually in hospitals but could potentially be automated to improve the efficiency…

Computation and Language · Computer Science 2021-07-20 Hang Dong , Víctor Suárez-Paniagua , William Whiteley , Honghan Wu

Supervised classification algorithms are used to solve a growing number of real-life problems around the globe. Their performance is strictly connected with the quality of labels used in training. Unfortunately, acquiring good-quality…

Machine Learning · Computer Science 2024-07-08 Daniel Kałuża , Andrzej Janusz , Dominik Ślęzak

The cost of annotating transcriptions for large speech corpora becomes a bottleneck to maximally enjoy the potential capacity of deep neural network-based automatic speech recognition models. In this paper, we present a new training…

Audio and Speech Processing · Electrical Eng. & Systems 2020-11-06 Jihwan Bang , Heesu Kim , YoungJoon Yoo , Jung-Woo Ha

Motivation: State-of-the-art biomedical named entity recognition (BioNER) systems often require handcrafted features specific to each entity type, such as genes, chemicals and diseases. Although recent studies explored using neural network…

Information Retrieval · Computer Science 2018-10-09 Xuan Wang , Yu Zhang , Xiang Ren , Yuhao Zhang , Marinka Zitnik , Jingbo Shang , Curtis Langlotz , Jiawei Han

Electronic Health Records (EHRs) contain rich, longitudinal patient information across structured (e.g., labs, vitals, and imaging) and unstructured (e.g., clinical notes) modalities. While deep learning models such as RNNs and Transformers…

Machine Learning · Computer Science 2026-02-18 Mohammad Al Olaimat , Shaika Chowdhury , Serdar Bozdag

Imperfections in data annotation, known as label noise, are detrimental to the training of machine learning models and have an often-overlooked confounding effect on the assessment of model performance. Nevertheless, employing experts to…

This work addresses challenges arising from extracting entities from textual data, including the high cost of data annotation, model accuracy, selecting appropriate evaluation criteria, and the overall quality of annotation. We present a…

Computation and Language · Computer Science 2020-04-28 Hussein S. Al-Olimat , Steven Gustafson , Jason Mackay , Krishnaprasad Thirunarayan , Amit Sheth

This paper presents a framework for Named Entity Recognition (NER) leveraging the Bidirectional Encoder Representations from Transformers (BERT) model in natural language processing (NLP). NER is a fundamental task in NLP with broad…

Computation and Language · Computer Science 2025-05-06 Mo Sun , Siheng Xiong , Yuankai Cai , Bowen Zuo

We design an active learning algorithm for cost-sensitive multiclass classification: problems where different errors have different costs. Our algorithm, COAL, makes predictions by regressing to each label's cost and predicting the…

Machine Learning · Computer Science 2021-10-13 Akshay Krishnamurthy , Alekh Agarwal , Tzu-Kuo Huang , Hal Daume , John Langford

Given two large lists of records, the task in entity resolution (ER) is to find the pairs from the Cartesian product of the lists that correspond to the same real world entity. Typically, passive learning methods on such tasks require large…

Databases · Computer Science 2022-01-19 Arjit Jain , Sunita Sarawagi , Prithviraj Sen