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To reduce global biodiversity loss, there is an urgent need to determine the most efficient allocation of conservation resources. Recently, there has been a growing trend for many governments to supplement public ownership and management of…

Populations and Evolution · Quantitative Biology 2010-11-02 Ascelin Gordon , William T. Langford , Matt D. White , James A. Todd , Lucy Bastin

Numerous modeling techniques exist to estimate abundance of plant and wildlife species. These methods seek to estimate abundance while accounting for multiple complexities found in ecological data, such as observational biases, spatial…

Applications · Statistics 2024-05-14 Jeffrey W. Doser , Andrew O. Finley , Marc Kéry , Elise F. Zipkin

A large and growing body of research demonstrates the value of local parks to mental and physical well-being. Recently, researchers have begun using passive digital data sources to investigate equity in usage; exactly who is benefiting from…

Diversity patterns of tree species in a tropical forest community are approached by a simple lattice model and investigated by Monte Carlo simulations using a backtracking method. Our spatially explicit neutral model is based on a simple…

Populations and Evolution · Quantitative Biology 2015-06-04 A. Derzsi , Z. Neda

Understanding how species are distributed across landscapes over time is a fundamental question in biodiversity research. Unfortunately, most species distribution models only target a single species at a time, despite strong ecological…

Machine Learning · Computer Science 2017-02-22 Di Chen , Yexiang Xue , Shuo Chen , Daniel Fink , Carla Gomes

Assessing the effects of anthropogenic disturbances on wildlife is a necessary conservation task. The soundscape is a critical habitat component for acoustically communicating organisms, but the use of the soundscape as a tool for assessing…

Applications · Statistics 2019-11-11 Jeffrey W. Doser , Andrew O. Finley , Eric P. Kasten , Stuart H. Gage

In this letter, we investigate the population dynamics in a May-Leonard formulation of the rock-paper-scissors game in which one or two species, which we shall refer to as "weak", have a reduced predation or reproduction probability. We…

Populations and Evolution · Quantitative Biology 2021-08-11 P. P. Avelino , B. F. de Oliveira , R. S. Trintin

When evaluating the ecological value of land use within a landscape, investigators typically rely on measures of habitat selection and habitat quality. Traditional measures of habitat selection and habitat quality require data from resource…

Populations and Evolution · Quantitative Biology 2016-07-19 Philip T. Patton , Krishna Pacifici , Jaime Collazo

Bird sounds possess distinctive spectral structure which may exhibit small shifts in spectrum depending on the bird species and environmental conditions. In this paper, we propose using convolutional recurrent neural networks on the task of…

Assessing the presence and abundance of birds is important for monitoring specific species as well as overall ecosystem health. Many birds are most readily detected by their sounds, and thus passive acoustic monitoring is highly…

Sound · Computer Science 2024-02-01 Dan Stowell , Yannis Stylianou , Mike Wood , Hanna Pamuła , Hervé Glotin

A three population system with a top predator population, i.e. the herbivores, and two prey populations, grass and trees, is considered to model the interaction of herbivores with natural resources. We apply the model for four natural…

Populations and Evolution · Quantitative Biology 2019-07-09 Giorgio Sabetta , Emma Perracchione , Ezio Venturino

The aim of the present paper is to elucidate the transition from collective to random behavior exhibited by various mathematical models of bird flocking. In particular, we compare Vicsek's model [Viscek et al., Phys. Rev. Lett. 75, 1226 --…

Adaptation and Self-Organizing Systems · Physics 2015-06-17 H. Christodoulidi , K. van der Weele , Ch. G. Antonopoulos , T. Bountis

Swarming is a conspicuous behavioural trait observed in bird flocks, fish shoals, insect swarms and mammal herds. It is thought to improve collective awareness and offer protection from predators. Many current models involve the hypothesis…

Quantitative Methods · Quantitative Biology 2015-06-22 Daniel J. G. Pearce , A. M. Miller , George Rowlands , Matthew S. Turner

Sound power levels or so-called source levels are essential quantities when it comes to evaluating the active space of bird species, both in the study of animal communication and when designing bioacoustic monitoring schemes. However,…

Applied Physics · Physics 2024-09-18 Guillaume Dutilleux

Invasive rodents pose significant ecological, economic, and public health challenges. Robust methods are needed for estimating population abundance to guide effective management. Traditional methods such as capture-recapture are often…

Populations and Evolution · Quantitative Biology 2025-04-22 Olivier Gimenez

Machine learning (ML) approaches are used more and more widely in biodiversity monitoring. In particular, an important application is the problem of predicting biodiversity indicators such as species abundance, species occurrence or species…

Applications · Statistics 2021-08-18 Geneviève Robin , Cathia Le Hasif

Flocks of birds exhibit a remarkable degree of coordination and collective response. It is not just that thousands of individuals fly, on average, in the same direction and at the same speed, but that even the fluctuations around the mean…

We quantitatively assess the impacts of Downgrading Protected Areas (PAD) on biodiversity in the U.S.. Results show that PAD events significantly reduce biodiversity. The proximity to PAD events decreases the biodiversity by 26.0% within 50…

Populations and Evolution · Quantitative Biology 2023-09-01 Yufei Li , Lingling Hou , Pengfei Liu

Collective animal movements produce spectacular natural phenomena that arise from simple local interactions among group members. Flocks of homing pigeons, Columba livia, provide a useful model for the study of collective motion and decision…

Biological Physics · Physics 2016-10-26 Andrea Flack , Zsuzsa Ákos , Máté Nagy , Tamás Vicsek , Dora Biro

Many wild species affected by human activities require multiple surveys with differing designs to capture behavioural response to wide ranging habitat conditions and map and quantify them. While data from for example intersecting but…

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