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Related papers: Path homology and temporal networks

200 papers

Cyclomatic complexity is an incompletely specified but mathematically principled software metric that can be usefully applied to both source and binary code. We consider the application of path homology as a stronger analogue of cyclomatic…

Software Engineering · Computer Science 2020-08-28 Steve Huntsman

As complex networks find applications in a growing range of disciplines, the diversity of naturally occurring and model networks being studied is exploding. The adoption of a well-developed collection of network taxonomies is a natural…

Combinatorics · Mathematics 2016-01-25 Ann Sizemore , Chad Giusti , Danielle Bassett

Topological features based on persistent homology capture high-order structural information so as to augment graph neural network methods. However, computing extended persistent homology summaries remains slow for large and dense graphs and…

Machine Learning · Computer Science 2022-11-16 Zuoyu Yan , Tengfei Ma , Liangcai Gao , Zhi Tang , Yusu Wang , Chao Chen

Digraphs are generalizations of graphs in which each edge is assigned with a direction or two directions. In this paper, we define discrete Morse functions on digraphs, and prove that the homology of the Morse complex and the path homology…

Algebraic Topology · Mathematics 2020-07-28 Chong Wang , Shiquan Ren

The identification and counting of small graph patterns, called network motifs, is a fundamental primitive in the analysis of networks, with application in various domains, from social networks to neuroscience. Several techniques have been…

Social and Information Networks · Computer Science 2021-01-19 Ilie Sarpe , Fabio Vandin

Recently, several complex network approaches to time series analysis have been developed and applied to study a wide range of model systems as well as real-world data, e.g., geophysical or financial time series. Among these techniques,…

Chaotic Dynamics · Physics 2012-03-23 Reik V. Donner , Jobst Heitzig , Jonathan F. Donges , Yong Zou , Norbert Marwan , Jürgen Kurths

With the proliferation of temporal graph data, there is a growing demand for analyzing information propagation patterns during graph evolution. Existing graph analysis systems, mostly based on static snapshots, struggle to effectively…

Databases · Computer Science 2025-12-30 Jiacheng Ding , Cong Guo , Xiaofei Zhang

Network visualisation techniques are important tools for the exploratory analysis of complex systems. While these methods are regularly applied to visualise data on complex networks, we increasingly have access to time series data that can…

Social and Information Networks · Computer Science 2020-08-26 Vincenzo Perri , Ingo Scholtes

A temporal (directed) graph is a graph whose edges are available only at specific times during its lifetime, $\tau$. Paths are sequences of adjacent edges whose appearing times are either strictly increasing or non-strictly increasingly…

Combinatorics · Mathematics 2023-03-01 Isnard Lopes Costa , Raul Lopes , Andrea Marino , Ana Silva

We give a linear-time algorithm that checks for isomorphism between two 0-1 matrices that obey the circular-ones property. This algorithm leads to linear-time isomorphism algorithms for related graph classes, including Helly circular-arc…

Data Structures and Algorithms · Computer Science 2013-09-18 Andrew R. Curtis , Min Chih Lin , Ross M. McConnell , Yahav Nussbaum , Francisco J. Soulignac , Jeremy P. Spinrad , Jayme L. Szwarcfiter

Long lived topological features are distinguished from short lived ones (considered as topological noise) in simplicial complexes constructed from complex networks. A new topological invariant, persistent homology, is determined and…

Mathematical Physics · Physics 2009-11-13 Danijela Horak , Slobodan Maletic , Milan Rajkovic

Rapid advances in high-throughput technologies have led to considerable interest in analyzing genome-scale data in the context of biological pathways, with the goal of identifying functional systems that are involved in a given phenotype.…

Quantitative Methods · Quantitative Biology 2015-06-01 Rosemary Braun , Sahil Shah

The knowledge of real-life traffic pattern is crucial for good understanding and analysis of transportation systems. This data is quite rare. In this paper we propose an algorithm for extracting both the real physical topology and the…

Physics and Society · Physics 2009-11-11 Maciej Kurant , Patrick Thiran

In a temporal network with discrete time-labels on its edges, entities and information can only ``flow'' along sequences of edges whose time-labels are non-decreasing (resp. increasing), i.e. along temporal (resp. strict temporal) paths.…

Data Structures and Algorithms · Computer Science 2025-01-29 George B. Mertzios , Hendrik Molter , Malte Renken , Paul G. Spirakis , Philipp Zschoche

One of the most important concepts in biological network analysis is that of network motifs, which are patterns of interconnections that occur in a given network at a frequency higher than expected in a random network. In this work we are…

Discrete Mathematics · Computer Science 2020-05-29 Diego P Rubert , Eloi Araujo , Marco A Stefanes , Jens Stoye , Fábio V Martinez

Besides the complexity in time or in number of messages, a common approach for analyzing distributed algorithms is to look at the assumptions they make on the underlying network. We investigate this question from the perspective of network…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-05-02 Arnaud Casteigts , Serge Chaumette , Afonso Ferreira

The analysis of complex and time-evolving interactions like social dynamics represents a current challenge for the science of complex systems. Temporal networks stand as a suitable tool to schematise such systems, encoding all the appearing…

This paper introduces and demonstrates a computational pipeline for the statistical analysis of shape graph datasets, namely geometric networks embedded in 2D or 3D spaces. Unlike traditional abstract graphs, our purpose is not only to…

Machine Learning · Computer Science 2026-02-19 Murad Hossen , Demetrio Labate , Nicolas Charon

We study random graph models for directed acyclic graphs, an important class of networks that includes citation networks, food webs, and feed-forward neural networks among others. We propose two specific models, roughly analogous to the…

Physics and Society · Physics 2009-10-16 Brian Karrer , M. E. J. Newman

Networks are a fundamental and flexible way of representing various complex systems. Many domains such as communication, citation, procurement, biology, social media, and transportation can be modeled as a set of entities and their…

Social and Information Networks · Computer Science 2020-08-07 Sumit Purohit , Lawrence B. Holder , George Chin