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Ptychography is a popular microscopic imaging modality for many scientific discoveries and sets the record for highest image resolution. Unfortunately, the high image resolution for ptychographic reconstruction requires significant amount…

Image and Video Processing · Electrical Eng. & Systems 2022-12-19 Xiao Wang , Aristeidis Tsaris , Debangshu Mukherjee , Mohamed Wahib , Peng Chen , Mark Oxley , Olga Ovchinnikova , Jacob Hinkle

GPUs are uniquely suited to accelerate (SQL) analytics workloads thanks to their massive compute parallelism and High Bandwidth Memory (HBM) -- when datasets fit in the GPU HBM, performance is unparalleled. Unfortunately, GPU HBMs remain…

Extreme Ultraviolet (EUV) photolithography is seen as the key enabler for increasing transistor density in the next decade. In EUV lithography, 13.5 nm EUV light is illuminated through a reticle, holding a pattern to be printed, onto a…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-02-22 Mohamed A. Bamakhrama , Alejandro Arrizabalaga , Frank Overman , Jean-Paul Smeets , Kornel van der Sommen , Remko van der Vossen , John Wagensveld

Splotch is a rendering algorithm for exploration and visual discovery in particle-based datasets coming from astronomical observations or numerical simulations. The strengths of the approach are production of high quality imagery and…

Instrumentation and Methods for Astrophysics · Physics 2016-09-23 Marzia Rivi , Claudio Gheller , Tim Dykes , Mel Krokos , Klaus Dolag

In this work, we have explored the advantages and drawbacks of using GPUs instead of CPUs in the calculation of a standard 2-point correlation function algorithm, which is useful for the analysis of Large Scale Structure of galaxies. Taking…

Instrumentation and Methods for Astrophysics · Physics 2012-05-01 Rafael Ponce , Miguel Cardenas-Montes , Juan Jose Rodriguez-Vazquez , Eusebio Sanchez , Ignacio Sevilla

In cryo-electron microscopy (EM), molecular structures are determined from large numbers of projection images of individual particles. To harness the full power of this single-molecule information, we use the Bayesian inference of EM…

Biomolecules · Quantitative Biology 2018-01-17 Pilar Cossio , David Rohr , Fabio Baruffa , Markus Rampp , Volker Lindenstruth , Gerhard Hummer

Region proposal is critical for object detection while it usually poses a bottleneck in improving the computation efficiency on traditional control-flow architectures. We have observed region proposal tasks are potentially suitable for…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-10-30 Wenzhi Fu , Jianlei Yang , Pengcheng Dai , Yiran Chen , Weisheng Zhao

The advanced magnetic resonance (MR) image reconstructions such as the compressed sensing and subspace-based imaging are considered as large-scale, iterative, optimization problems. Given the large number of reconstructions required by the…

Computational Engineering, Finance, and Science · Computer Science 2020-06-26 Tianjian Lu , Thibault Marin , Yue Zhuo , Yi-Fan Chen , Chao Ma

We introduce GRay, a massively parallel integrator designed to trace the trajectories of billions of photons in a curved spacetime. This GPU-based integrator employs the stream processing paradigm, is implemented in CUDA C/C++, and runs on…

Instrumentation and Methods for Astrophysics · Physics 2015-06-15 Chi-kwan Chan , Dimitrios Psaltis , Feryal Ozel

Guided upsampling is an effective approach for accelerating high-resolution image processing. In this paper, we propose a simple yet effective guided upsampling method. Each pixel in the high-resolution image is represented as a linear…

Computer Vision and Pattern Recognition · Computer Science 2023-07-20 Shuangbing Song , Fan Zhong , Tianju Wang , Xueying Qin , Changhe Tu

We present a versatile GPU-based parallel version of Logistic Regression (LR), aiming to address the increasing demand for faster algorithms in binary classification due to large data sets. Our implementation is a direct translation of the…

Machine Learning · Computer Science 2023-08-22 Nechba Mohammed , Mouhajir Mohamed , Sedjari Yassine

This paper presents, to the author's knowledge, the first graphics processing unit (GPU) accelerated program that solves the evolution of interacting scalar fields in an expanding universe. We present the implementation in NVIDIA's Compute…

Instrumentation and Methods for Astrophysics · Physics 2014-11-20 Jani Sainio

The rapid growth in machine learning models, especially in natural language processing and computer vision, has led to challenges when running these models on hardware with limited resources. This paper introduces Superpipeline, a new…

Machine Learning · Computer Science 2024-10-14 Reza Abbasi , Sernam Lim

Incoherent dedispersion is a computationally intensive problem that appears frequently in pulsar and transient astronomy. For current and future transient pipelines, dedispersion can dominate the total execution time, meaning its…

Instrumentation and Methods for Astrophysics · Physics 2015-06-03 Benjamin R. Barsdell , Matthew Bailes , David G. Barnes , Christopher J. Fluke

The use of FPGAs for efficient graph processing has attracted significant interest. Recent memory subsystem upgrades including the introduction of HBM in FPGAs promise to further alleviate memory bottlenecks. However, modern multi-channel…

Hardware Architecture · Computer Science 2022-03-08 Xinyu Chen , Yao Chen , Feng Cheng , Hongshi Tan , Bingsheng He , Weng-Fai Wong

The CHIME Pathfinder is a new interferometric radio telescope that uses a hybrid FPGA/GPU FX correlator. The GPU-based X-engine of this correlator processes over 819 Gb/s of 4+4-bit complex astronomical data from N=256 inputs across a 400…

Instrumentation and Methods for Astrophysics · Physics 2015-06-16 Andre Recnik , Kevin Bandura , Nolan Denman , Adam D. Hincks , Gary Hinshaw , Peter Klages , Ue-Li Pen , Keith Vanderlinde

The GPU as a digital signal processing accelerator for cloud RAN is investigated. A new design for a 5G NR low density parity check code decoder running on a GPU is presented. The algorithm is flexibly adaptable to GPU architecture to…

Networking and Internet Architecture · Computer Science 2020-09-14 Jonathan Ling , Paul Cautereels

In this paper, we aim to introduce a new perspective when comparing highly parallelized algorithms on GPU: the energy consumption of the GPU. We give an analysis of the performance of linear algebra operations, including addition of…

Numerical Analysis · Mathematics 2021-12-22 Abal-Kassim Cheik Ahamed , Alban Desmaison , Frederic Magoules

In many Multimedia content analytics frameworks feature likelihood maps represented as histograms play a critical role in the overall algorithm. Integral histograms provide an efficient computational framework for extracting multi-scale…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-11-07 Mahdieh Poostchi , Kannappan Palaniappan , Da Li , Michela Becchi , Filiz Bunyak , Guna Seetharaman

Analysis of video images is a common way to determine the properties of an electron or synchrotron radiation beam. At BESSY a cost-efficient frame grabber hardware controlled by a Windows PC allows one to perform such an analysis in…

Instrumentation and Detectors · Physics 2007-05-23 B. Franksen , R. Bakker , B. Kuner , J. Rahn , H. Rüdiger