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Code retrieval is to find the code snippet from a large corpus of source code repositories that highly matches the query of natural language description. Recent work mainly uses natural language processing techniques to process both query…

Artificial Intelligence · Computer Science 2021-06-23 Xiang Ling , Lingfei Wu , Saizhuo Wang , Gaoning Pan , Tengfei Ma , Fangli Xu , Alex X. Liu , Chunming Wu , Shouling Ji

We review two recently developed efficient methods for calculating rate constants of processes dominated by rare events in high-dimensional complex systems. The first is transition interface sampling (TIS), based on the measurement of…

Statistical Mechanics · Physics 2009-11-10 Titus S. van Erp , Peter G. Bolhuis

This work presents the use of graph learning for the prediction of multi-step experimental outcomes for applications across experimental research, including material science, chemistry, and biology. The viability of geometric learning for…

Machine Learning · Computer Science 2024-08-13 Amanda A. Volk , Robert W. Epps , Jeffrey G. Ethier , Luke A. Baldwin

We consider multivariate two-sample tests of means, where the location shift between the two populations is expected to be related to a known graph structure. An important application of such tests is the detection of differentially…

Quantitative Methods · Quantitative Biology 2014-05-16 Laurent Jacob , Pierre Neuvial , Sandrine Dudoit

Reducing the running time of graph algorithms is vital for tackling real-world problems such as shortest paths and matching in large-scale graphs, where path information plays a crucial role. To address this critical challenge, this paper…

Data Structures and Algorithms · Computer Science 2026-04-14 Akshar Chavan , Sanaz Rabinia , Daniel Grosu , Marco Brocanelli

Graph Neural Networks (GNNs) have emerged as powerful tools for analyzing and learning representations from graph-structured data. A crucial prerequisite for the outstanding performance of GNNs is the availability of complete graph…

Machine Learning · Computer Science 2024-08-12 Peng Yuan , Peng Tang

In reaction rate theory, in input-output type models and in reaction-diffusion problems when the total derivatives are replaced by fractional derivatives the solutions are obtained in terms of Mittag-Leffler functions and their…

Statistical Mechanics · Physics 2011-03-01 A. M. Mathai , H. J. Haubold

Fuzzy systems (FSs) have enjoyed wide applications in various fields, including pattern recognition, intelligent control, data mining and bioinformatics, which is attributed to the strong interpretation and learning ability. In traditional…

Artificial Intelligence · Computer Science 2023-09-21 Fuping Hu , Zhaohong Deng , Zhenping Xie , Kup-Sze Choi , Shitong Wang

Recommender Systems (RSs) are used to provide users with personalized item recommendations and help them overcome the problem of information overload. Currently, recommendation methods based on deep learning are gaining ground over…

Information Retrieval · Computer Science 2023-01-19 Nikzad Chizari , Niloufar Shoeibi , María N. Moreno-García

Graph neural networks (GNNs) are a popular class of parametric model for learning over graph-structured data. Recent work has argued that GNNs primarily use the graph for feature smoothing, and have shown competitive results on benchmark…

Machine Learning · Computer Science 2020-11-20 Lingfan Yu , Jiajun Shen , Jinyang Li , Adam Lerer

Graph classification aims to categorise graphs based on their structure and node attributes. In this work, we propose to tackle this task using tools from graph signal processing by deriving spectral features, which we then use to design…

Machine Learning · Computer Science 2023-06-07 Felix L. Opolka , Yin-Cong Zhi , Pietro Liò , Xiaowen Dong

Statistical field theory methods have been very successful with a number of random graph and random matrix problems, but it is challenging to apply these methods to graphs with prescribed degree sequences due to the extensive number of…

Statistical Mechanics · Physics 2025-05-20 Pawat Akara-pipattana , Oleg Evnin

Graph-related applications have experienced significant growth in academia and industry, driven by the powerful representation capabilities of graph. However, efficiently executing these applications faces various challenges, such as load…

Hardware Architecture · Computer Science 2023-09-15 Zhengyang Lv , Mingyu Yan , Xin Liu , Mengyao Dong , Xiaochun Ye , Dongrui Fan , Ninghui Sun

Graph inference plays an essential role in machine learning, pattern recognition, and classification. Signal processing based approaches in literature generally assume some variational property of the observed data on the graph. We make a…

Information Theory · Computer Science 2020-08-24 B. Subbareddy , Aditya Siripuram , Jingxin Zhang

Graph Neural Networks (GNNs) have become a topic of intense research recently due to their powerful capability in high-dimensional classification and regression tasks for graph-structured data. However, as GNNs typically define the graph…

Machine Learning · Computer Science 2019-10-31 Ming Li , Zheng Ma , Yu Guang Wang , Xiaosheng Zhuang

Graph signal processing analyzes signals supported on the nodes of a graph by defining the shift operator in terms of a matrix, such as the graph adjacency matrix or Laplacian matrix, related to the structure of the graph. With respect to…

Signal Processing · Electrical Eng. & Systems 2018-03-01 Stephen Kruzick , José M. F. Moura

A wide range of models have been proposed for Graph Generative Models, necessitating effective methods to evaluate their quality. So far, most techniques use either traditional metrics based on subgraph counting, or the representations of…

Machine Learning · Statistics 2022-06-14 Hamed Shirzad , Kaveh Hassani , Danica J. Sutherland

Graphons have traditionally served as limit objects for dense graph sequences, with the cut distance serving as the metric for convergence. However, sparse graph sequences converge to the trivial graphon under the conventional definition of…

Signal Processing · Electrical Eng. & Systems 2023-09-12 Xingchao Jian , Feng Ji , Wee Peng Tay

Graph-to-text generation aims to generate fluent texts from graph-based data. In this paper, we investigate two recently proposed pretrained language models (PLMs) and analyze the impact of different task-adaptive pretraining strategies for…

Computation and Language · Computer Science 2021-09-28 Leonardo F. R. Ribeiro , Martin Schmitt , Hinrich Schütze , Iryna Gurevych

In recent years, numerous graph generative models (GGMs) have been proposed. However, evaluating these models remains a considerable challenge, primarily due to the difficulty in extracting meaningful graph features that accurately…

Machine Learning · Computer Science 2025-03-18 Chengen Wang , Murat Kantarcioglu
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