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Most real-world networks are noisy and incomplete samples from an unknown target distribution. Refining them by correcting corruptions or inferring unobserved regions typically improves downstream performance. Inspired by the impressive…

Graph pooling compresses graph information into a compact representation. State-of-the-art graph pooling methods follow a hierarchical approach, which reduces the graph size step-by-step. These methods must balance memory efficiency with…

Machine Learning · Computer Science 2024-02-23 Yunchong Song , Siyuan Huang , Xinbing Wang , Chenghu Zhou , Zhouhan Lin

Probabilistic graphical models (PGMs) serve as a powerful framework for modeling complex systems with uncertainty and extracting valuable insights from data. However, users face challenges when applying PGMs to their problems in terms of…

Machine Learning · Computer Science 2024-05-29 Jiantong Jiang , Zeyi Wen , Peiyu Yang , Atif Mansoor , Ajmal Mian

In real-world scenarios, large graphs represent relationships among entities in complex systems. Mining these large graphs often containing millions of nodes and edges helps uncover structural patterns and meaningful insights. Dividing a…

Social and Information Networks · Computer Science 2025-09-12 Shrabani Ghosh , Erik Saule

As much as Graph Convolutional Networks (GCNs) have shown tremendous success in recommender systems and collaborative filtering (CF), the mechanism of how they, especially the core components (\textit{i.e.,} neighborhood aggregation)…

Information Retrieval · Computer Science 2022-04-26 Shaowen Peng , Kazunari Sugiyama , Tsunenori Mine

Graphs naturally appear in several real-world contexts including social networks, the web network, and telecommunication networks. While the analysis and the understanding of graph structures have been a central area of study in algorithm…

Data Structures and Algorithms · Computer Science 2019-09-17 Gramoz Goranci

Deep neural networks have enabled researchers to create powerful generalized frameworks, such as transformers, that can be used to solve well-studied problems in various application domains, such as text and image. However, such generalized…

Machine Learning · Computer Science 2025-02-12 Rudrajit Dawn , Madhusudan Ghosh , Partha Basuchowdhuri , Sudip Kumar Naskar

Graph Pattern based Node Matching (GPNM) is to find all the matches of the nodes in a data graph GD based on a given pattern graph GP. GPNM has become increasingly important in many applications, e.g., group finding and expert…

Databases · Computer Science 2020-02-19 Guohao Sun , Guanfeng Liu , Yan Wang , Xiaofang Zhou

Graph Neural Networks (GNNs) exploit signals from node features and the input graph topology to improve node classification task performance. However, these models tend to perform poorly on heterophilic graphs, where connected nodes have…

Machine Learning · Computer Science 2021-12-08 Vijay Lingam , Chanakya Ekbote , Manan Sharma , Rahul Ragesh , Arun Iyer , Sundararajan Sellamanickam

Modern heterogeneous systems consist of many different processing units, such as CPUs, GPUs, FPGAs and AI units. A central problem in the design of applications in this environment is to find a beneficial mapping of tasks to processing…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-04-15 Martin Wilhelm , Thilo Pionteck

Graph foundation models have demonstrated remarkable adaptability across diverse downstream tasks through large-scale pretraining on graphs. However, existing implementations of the backbone model, graph transformers, are typically limited…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-04-21 Jun-Liang Lin , Kamesh Madduri , Mahmut Taylan Kandemir

Distributed processing of large-scale graph data has many practical applications and has been widely studied. In recent years, a lot of distributed graph processing frameworks and algorithms have been proposed. While many efforts have been…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-10-29 Lingkai Meng , Yu Shao , Long Yuan , Longbin Lai , Peng Cheng , Xue Li , Wenyuan Yu , Wenjie Zhang , Xuemin Lin , Jingren Zhou

Affordable, high-quality whole-genome assemblies have made it possible to construct rich pangenomes that capture haplotype diversity across many species. As these datasets grow, they motivate the development of specialized techniques…

Genomics · Quantitative Biology 2025-12-19 Gorkem Kadir Solun , Ugur Dogrusoz

Graph condensation reduces the size of large graphs while preserving performance, addressing the scalability challenges of Graph Neural Networks caused by computational inefficiencies on large datasets. Existing methods often rely on…

Machine Learning · Computer Science 2025-10-10 Lin Wang , Qing Li

Sampling methods (e.g., node-wise, layer-wise, or subgraph) has become an indispensable strategy to speed up training large-scale Graph Neural Networks (GNNs). However, existing sampling methods are mostly based on the graph structural…

Machine Learning · Computer Science 2021-09-07 Weilin Cong , Rana Forsati , Mahmut Kandemir , Mehrdad Mahdavi

Deep graph generative modeling has proven capable of learning the distribution of complex, multi-scale structures characterizing real-world graphs. However, one of the main limitations of existing methods is their large output space, which…

Machine Learning · Computer Science 2023-06-01 Nathaniel Diamant , Alex M. Tseng , Kangway V. Chuang , Tommaso Biancalani , Gabriele Scalia

Nowadays, frequent pattern mining (FPM) on large graphs receives increasing attention, since it is crucial to a variety of applications, e.g., social analysis. Informally, the FPM problem is defined as finding all the patterns in a large…

Databases · Computer Science 2022-05-04 Xin Wang , Zhuo Lan , Yu-Ang He , Yang Wang , Zhi-Gui Liu , Wen-Bo Xie

Matrix completion models are among the most common formulations of recommender systems. Recent works have showed a boost of performance of these techniques when introducing the pairwise relationships between users/items in the form of…

Machine Learning · Computer Science 2017-04-25 Federico Monti , Michael M. Bronstein , Xavier Bresson

Over the past decade, we witness an increasing amount of interest in the design of exact exponential-time and parameterized algorithms for problems in Graph Drawing. Unfortunately, we still lack knowledge of general methods to develop such…

Data Structures and Algorithms · Computer Science 2023-10-10 Siddharth Gupta , Guy Sa'ar , Meirav Zehavi

Embedding networks into a fixed dimensional feature space, while preserving its essential structural properties is a fundamental task in graph analytics. These feature vectors (graph descriptors) are used to measure the pairwise similarity…

Databases · Computer Science 2020-02-20 Zohair Raza Hassan , Mudassir Shabbir , Imdadullah Khan , Waseem Abbas