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Contact matrices are a commonly adopted data representation, used to develop compartmental models for epidemic spreading, accounting for the contact heterogeneities across age groups. Their estimation, however, is generally time and effort…

The estimation from available data of parameters governing epidemics is a major challenge. In addition to usual issues (data often incomplete and noisy), epidemics of the same nature may be observed in several places or over different…

Methodology · Statistics 2021-09-20 Romain Narci , Maud Delattre , Catherine Larédo , Elisabeta Vergu

The statistics of outbreaks in a model for the propagation of meningococcal diseases is analyzed, taking into account the possibility that the population is fragmented into weakly connected patches. It is shown that, depending on the size…

Populations and Evolution · Quantitative Biology 2007-05-23 F. Guinea , V. A. A. Jansen , N. Stollenwerk

Recent development in unmanned UAV technology paved the way for numerous applications in diverse cross discipline fields. One of the main feature of UAV s are their portability in terms of size that allows them to navigate through fairly…

Populations and Evolution · Quantitative Biology 2017-11-15 Chiranjib Patra

Characterizing the shared memberships of individuals in a classification scheme poses severe interpretability issues, even when using a moderate number of classes (say 4). Mixed membership models quantify this phenomenon, but they typically…

Applications · Statistics 2021-01-01 Massimiliano Russo , Burton H. Singer , David B. Dunson

Infectious zoonotic disease emergence, through spillover events, is of global concern and has the potential to cause significant harm to society, as recently demonstrated by COVID-19. More than 70% of the 400 infectious diseases that…

Populations and Evolution · Quantitative Biology 2024-09-26 Maryam Golchin , Moreno Di Marco , Paul Horwood , Dean Paini , Andrew Hoskins , R. I. Hickson

Univariate zero-inflated models are increasingly being used to account for excess zeros in spatio-temporal infectious disease counts. However, the multivariate case is challenging due to the need to account for correlations across space,…

The objective of this study was to characterize the spatiotemporal dynamics and climatic and social-ecological risk factors associated with the largest dengue epidemic to date in Machala, Ecuador, to inform the development of a dengue EWS.…

Data missing not at random (MNAR) is a major challenge in survey sampling. We propose an approach based on registry data to deal with non-ignorable missingness in health examination surveys. The approach relies on follow-up data available…

Applications · Statistics 2016-10-31 Juho Kopra , Tommi Härkänen , Hanna Tolonen , Juha Karvanen

Background: The global spread of the severe acute respiratory syndrome (SARS) epidemic has clearly shown the importance of considering the long-range transportation networks in the understanding of emerging diseases outbreaks. The…

Other Quantitative Biology · Quantitative Biology 2008-01-16 Vittoria Colizza , Alain Barrat , Marc Barthelemy , Alessandro Vespignani

We propose a model-based vulnerability index of the population from Uruguay to vector-borne diseases. We have available measurements of a set of variables in the census tract level of the 19 Departmental capitals of Uruguay. In particular,…

Applications · Statistics 2012-03-20 Hedibert F. Lopes , Alexandra M. Schmidt , Esther Salazar , Mariana Gómez , Marcel Achkar

People who inject drugs are an important population to study in order to reduce transmission of blood-borne illnesses including HIV and Hepatitis. In this paper we estimate the HIV and Hepatitis C prevalence among people who inject drugs,…

Applications · Statistics 2017-12-27 Miles Q. Ott , Krista J. Gile , Matthew T. Harrison , Lisa G. Johnston , Joseph W. Hogan

Spatially-explicit estimates of population density, together with appropriate estimates of uncertainty, are required in many management contexts. Density Surface Models (DSMs) are a two-stage approach for estimating spatially-varying…

Methodology · Statistics 2021-02-25 Mark V Bravington , David L Miller , Sharon L Hedley

Malaria, a fatal but curable disease claims hundreds of thousands of lives every year. Early and correct diagnosis is vital to avoid health complexities, however, it depends upon the availability of costly microscopes and trained experts to…

Computer Vision and Pattern Recognition · Computer Science 2022-04-19 Waqas Sultani , Wajahat Nawaz , Syed Javed , Muhammad Sohail Danish , Asma Saadia , Mohsen Ali

The main idea in this paper is that the age associated with reported measles cases can be used to estimate the number of undetected measles infections. Somewhat surprisingly, even with age only to the nearest year, estimates of…

Populations and Evolution · Quantitative Biology 2022-02-24 Niket Thakkar

European sardine is experiencing an overfishing around the world. The dynamics of the industrial and artisanal fishing in the Mediterranean Sea from 1970 to 2014 by country was assessed by means of Bayesian joint longitudinal modelling that…

Applications · Statistics 2020-09-08 Gabriel Calvo , Carmen Armero , Maria Grazia Pennino , Luigi Spezia

After their re-emergence in the last decades, dengue fever and other vector-borne diseases are a potential threat to the lives of millions of people. Based on a data set of dengue cases in the Brazilian city of Fortaleza, collected from…

Health surveys allow exploring health indicators that are of great value from a public health point of view and that cannot normally be studied from regular health registries. These indicators are usually coded as ordinal variables and may…

Households play a crucial role in the propagation of infectious diseases due to the frequent and prolonged interactions that typically occur between their members. Recent studies have emphasized the need to include socioeconomic variables…

Marine Protected Areas (MPAs) have been established globally to conserve marine resources. Given their maintenance costs and impact on commercial fishing, it is critical to evaluate their effectiveness to support future conservation. In…

Methodology · Statistics 2026-05-11 Dongjae Son , Brian J. Reich , Erin M. Schliep , Shu Yang , David A. Gill