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The reconstruction of phylogenetic networks is an important but challenging problem in phylogenetics and genome evolution, as the space of phylogenetic networks is vast and cannot be sampled well. One approach to the problem is to solve the…

Populations and Evolution · Quantitative Biology 2023-04-14 Louxin Zhang , Niloufar Abhari , Caroline Colijn , Yufeng Wu

The present work provides a new approach to evolve ligand structures which represent possible drug to be docked to the active site of the target protein. The structure is represented as a tree where each non-empty node represents a…

Neural and Evolutionary Computing · Computer Science 2012-05-30 Arnab Ghosh , Avishek Ghosh , Arkabandhu Chowdhury , Amit Konar

This paper proposes graph analysis methods to fully automate the fault location identification task in power distribution systems. The proposed methods take basic unordered data from power distribution systems as input, including branch…

Systems and Control · Electrical Eng. & Systems 2025-10-23 Ali Shakeri Kahnamouei , Saeed Lotfifard

This paper formulates a chance-constrained optimal distribution network partitioning (ODNP) problem addressing uncertainties in load and renewable energy generation; and presents a solution methodology using sample average approximation…

Systems and Control · Electrical Eng. & Systems 2020-09-09 Shuchismita Biswas , Manish K. Singh , Virgilio Centeno

With the increasing share of renewable and distributed generation in electrical distribution systems, Active Network Management (ANM) becomes a valuable option for a distribution system operator to operate his system in a secure and…

Systems and Control · Computer Science 2016-06-02 Quentin Gemine , Damien Ernst , Bertrand Cornélusse

For various optimization methods, gradient descent-based algorithms can achieve outstanding performance and have been widely used in various tasks. Among those commonly used algorithms, ADAM owns many advantages such as fast convergence…

Neural and Evolutionary Computing · Computer Science 2021-05-05 Jiyang Bai , Yuxiang Ren , Jiawei Zhang

In this paper, we propose a new approach of network performance analysis, which is based on our previous works on the deterministic network analysis using the Gaussian approximation (DNA-GA). First, we extend our previous works to a…

Information Theory · Computer Science 2017-09-27 Ming Ding , David Lopez Perez , Guoqiang Mao , Zihuai Lin

Analyzing large datasets to select optimal features is one of the most important research areas in machine learning and data mining. This feature selection procedure involves dimensionality reduction which is crucial in enhancing the…

Neural and Evolutionary Computing · Computer Science 2024-09-24 Zhila Yaseen Taha , Abdulhady Abas Abdullah , Tarik A. Rashid

This paper proposes a data-driven distributed voltage control approach based on the spectrum clustering and the enhanced multi-agent deep reinforcement learning (MADRL) algorithm. Via the unsupervised clustering, the whole distribution…

Systems and Control · Electrical Eng. & Systems 2020-06-02 Di Cao , Junbo Zhao , Weihao Hu , Fei Ding , Qi Huang , Zhe Chen

Finding optimal bidding strategies for generation units in electricity markets would result in higher profit. However, it is a challenging problem due to the system uncertainty which is due to the unknown other generation units' strategies.…

Artificial Intelligence · Computer Science 2022-08-15 Pegah Rokhforoz , Olga Fink

In this paper, a new approach has been presented to design sub-optimal state feedback regulators over Networked Control Systems (NCS) with random packet losses. The optimal regulator gains, producing guaranteed stability are designed with…

Optimization and Control · Mathematics 2013-06-18 Indranil Pan , Saptarshi Das

A genetic algorithm (GA) is a search-based optimization technique based on the principles of Genetics and Natural Selection. We present an algorithm which enhances the classical GA with input from quantum annealers. As in a classical GA,…

Quantum Physics · Physics 2022-09-16 Steven Abel , Luca A. Nutricati , Michael Spannowsky

Numerical methods based on tensor networks have been extensively explored in the research of quantum many-body systems in recent years. It has been recognized that the ability of tensor networks to describe a quantum many-body state…

Statistical Mechanics · Physics 2025-11-19 Toshiya Hikihara , Hiroshi Ueda , Kouichi Okunishi , Kenji Harada , Tomotoshi Nishino

We study the NP-hard problem of approximating a Minimum Routing Cost Spanning Tree in the message passing model with limited bandwidth (CONGEST model). In this problem one tries to find a spanning tree of a graph $G$ over $n$ nodes that…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-06-06 Alexandra Hochuli , Stephan Holzer , Roger Wattenhofer

We study diffusion and consensus based optimization of a sum of unknown convex objective functions over distributed networks. The only access to these functions is through stochastic gradient oracles, each of which is only available at a…

Numerical Analysis · Computer Science 2015-09-01 N. Denizcan Vanli , Muhammed O. Sayin , Suleyman S. Kozat

We propose an extended genetic algorithm (GA) with different local environmental conditions. Genetic entities, or configurations, are put on nodes in a ring structure, and location-dependent environmental conditions are applied for each…

Data Analysis, Statistics and Probability · Physics 2022-06-22 Daekyung Lee , Beom Jun Kim

The concept of extended cloud requires efficient network infrastructure to support ecosystems reaching form the edge to the cloud(s). Standard approaches to network load balancing deliver static solutions that are insufficient for the…

Networking and Internet Architecture · Computer Science 2023-07-20 Marek Bolanowski , Alicja Gerka , Andrzej Paszkiewicz , Maria Ganzha , Marcin Paprzycki

We study the complexity of finding communication trees with the lowest possible completion time for rooted, irregular gather and scatter collective communication operations in fully connected, $k$-ported communication networks under a…

Computational Complexity · Computer Science 2018-11-28 Jesper Larsson Träff

Optimizing a neural network's performance is a tedious and time taking process, this iterative process does not have any defined solution which can work for all the problems. Optimization can be roughly categorized into - Architecture and…

Machine Learning · Computer Science 2019-12-16 Siddhartha Dhar Choudhury , Shashank Pandey , Kunal Mehrotra

Genetic Algorithms (GAs) are known for their efficiency in solving combinatorial optimization problems, thanks to their ability to explore diverse solution spaces, handle various representations, exploit parallelism, preserve good…

Neural and Evolutionary Computing · Computer Science 2023-09-29 Majid Sohrabi , Amir M. Fathollahi-Fard , Vasilii A. Gromov
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