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The in-memory graph layout or organization has a considerable impact on the time and energy efficiency of distributed memory graph computations. It affects memory locality, inter-task load balance, communication time, and overall memory…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-01-04 George M Slota , Sivasankaran Rajamanickam , Kamesh Madduri

A popular method of force-directed graph drawing is multidimensional scaling using graph-theoretic distances as input. We present an algorithm to minimize its energy function, known as stress, by using stochastic gradient descent (SGD) to…

Computational Geometry · Computer Science 2018-06-29 Jonathan X. Zheng , Samraat Pawar , Dan F. M. Goodman

Readability criteria, such as distance or neighborhood preservation, are often used to optimize node-link representations of graphs to enable the comprehension of the underlying data. With few exceptions, graph drawing algorithms typically…

Data Structures and Algorithms · Computer Science 2020-08-14 Reyan Ahmed , Felice De Luca , Sabin Devkota , Stephen Kobourov , Mingwei Li

Graphs naturally appear in several real-world contexts including social networks, the web network, and telecommunication networks. While the analysis and the understanding of graph structures have been a central area of study in algorithm…

Data Structures and Algorithms · Computer Science 2019-09-17 Gramoz Goranci

We propose an efficient framework that integrates distance-aware multi-hop message passing with dynamic topology refinement. Unlike standard GNNs that rely on shallow, fixed-hop aggregation, DRTR leverages both static preprocessing and…

Machine Learning · Computer Science 2025-12-01 Dong Liu , Yanxuan Yu

Graph coarsening is a widely used dimensionality reduction technique for approaching large-scale graph machine learning problems. Given a large graph, graph coarsening aims to learn a smaller-tractable graph while preserving the properties…

Machine Learning · Statistics 2022-10-04 Manoj Kumar , Anurag Sharma , Sandeep Kumar

In the past decades, many graph drawing techniques have been proposed for generating aesthetically pleasing graph layouts. However, it remains a challenging task since different layout methods tend to highlight different characteristics of…

Machine Learning · Computer Science 2021-06-30 Xiaoqi Wang , Kevin Yen , Yifan Hu , Han-Wei Shen

Dimensionality Reduction (DR) scatterplot layouts have become a ubiquitous visualization tool for analyzing multidimensional datasets. Despite their popularity, such scatterplots suffer from occlusion, especially when informative glyphs are…

Computer Vision and Pattern Recognition · Computer Science 2023-10-12 Gladys M. Hilasaca , Wilson E. Marcílio-Jr , Danilo M. Eler , Rafael M. Martins , Fernando V. Paulovich

Drawing large graphs appropriately is an important step for the visual analysis of data from real-world networks. Here we present a novel multilevel algorithm to compute a graph layout with respect to a recently proposed metric that…

Data Structures and Algorithms · Computer Science 2015-08-11 Henning Meyerhenke , Martin Nöllenburg , Christian Schulz

We introduce FastGraph, a novel GPU-optimized k-nearest neighbor algorithm specifically designed to accelerate graph construction in low-dimensional spaces (2-10 dimensions), critical for high-performance graph neural networks. Our method…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-11-14 Aarush Agarwal , Raymond He , Jan Kieseler , Matteo Cremonesi , Shah Rukh Qasim

Dynamic graphs model many real-world applications, and as their sizes grow, efficiently storing and updating them becomes critical. We present RadixGraph, a fast and memory-efficient data structure for dynamic graph storage. RadixGraph…

Databases · Computer Science 2026-01-23 Haoxuan Xie , Junfeng Liu , Siqiang Luo , Kai Wang

Order diagrams allow human analysts to understand and analyze structural properties of ordered data. While an experienced expert can create easily readable order diagrams, the automatic generation of those remains a hard task. In this work,…

Computational Geometry · Computer Science 2021-02-05 Dominik Dürrschnabel , Gerd Stumme

Both Dimensionality Reduction (DR) and Graph Drawing (GD) aim to visualize abstract, non-linear structures, yet rely on different optimization paradigms. This contrast is evident in Multidimensional Scaling (MDS), which typically depends on…

Machine Learning · Computer Science 2026-05-04 Daniel Hangan , Stephen Kobourov , Jacob Miller

Graph Visualization, also known as Graph Drawing, aims to find geometric embeddings of graphs that optimize certain criteria. Stress is a widely used metric; stress is minimized when every pair of nodes is positioned at their shortest path…

Computational Geometry · Computer Science 2024-02-13 Florian Grötschla , Joël Mathys , Robert Veres , Roger Wattenhofer

In this paper, we present a hybrid graph-drawing algorithm (GDA) for layouting large, naturally-clustered, disconnected graphs. We called it a hybrid algorithm because it is an implementation of a series of already known graph-drawing and…

Graphics · Computer Science 2015-07-13 Toni-Jan Keith P. Monserrat , Jaderick P. Pabico , Eliezer A. Albacea

There exist many orthogonal graph drawing algorithms that minimize edge crossings or edge bends, however they produce unsatisfactory drawings in many practical cases. In this paper we present a grid-based algorithm for drawing orthogonal…

Other Computer Science · Computer Science 2018-07-26 Karlis Freivalds , Jans Glagolevs

While a multitude of studies have been conducted on graph drawing, many existing methods only focus on optimizing a single aesthetic aspect of graph layouts, which can lead to sub-optimal results. There are a few existing methods that have…

Machine Learning · Computer Science 2023-08-15 Xiaoqi Wang , Kevin Yen , Yifan Hu , Han-Wei Shen

Subgraph listing is a fundamental problem in graph theory and has wide applications in areas like sociology, chemistry, and social networks. Modern graphs can usually be large-scale as well as highly dynamic, which challenges the efficiency…

Databases · Computer Science 2020-09-01 Xun Jian , Yue Wang , Xiayu Lei , Yanyan Shen , Lei Chen

In this era of data deluge, many signal processing and machine learning tasks are faced with high-dimensional datasets, including images, videos, as well as time series generated from social, commercial and brain network interactions. Their…

Machine Learning · Computer Science 2018-03-30 Yanning Shen , Panagiotis A. Traganitis , Georgios B. Giannakis

While many graph drawing algorithms consider nodes as points, graph visualization tools often represent them as shapes. These shapes support the display of information such as labels or encode various data with size or color. However, they…

Computational Geometry · Computer Science 2023-04-18 Loann Giovannangeli , Frederic Lalanne , Romain Giot , Romain Bourqui
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