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Markov State Models (MSMs) are a powerful framework to reproduce the long-time conformational dynamics of biomolecules using a set of short Molecular Dynamics (MD) simulations. However, precise kinetics predictions of MSMs heavily rely on…

Biomolecules · Quantitative Biology 2018-06-27 Qihua Chen , Jiangyan Feng , Shriyaa Mittal , Diwakar Shukla

Genetic Algorithms (GAs) are explored as a tool for probing new physics with high dimensionality. We study the 19-dimensional pMSSM, including experimental constraints from all sources and assessing the consistency of potential signals of…

High Energy Physics - Phenomenology · Physics 2018-05-14 Steven Abel , David G. Cerdeno , Sandra Robles

AI-driven design problems, such as DNA/protein sequence design, are commonly tackled from two angles: generative modeling, which efficiently captures the feasible design space (e.g., natural images or biological sequences), and model-based…

We investigate a family of $(\mu+\lambda)$ Genetic Algorithms (GAs) which creates offspring either from mutation or by recombining two randomly chosen parents. By scaling the crossover probability, we can thus interpolate from a fully…

Neural and Evolutionary Computing · Computer Science 2021-02-16 Furong Ye , Hao Wang , Carola Doerr , Thomas Bäck

The performance of multi-objective evolutionary algorithms deteriorates appreciably in solving many-objective optimization problems which encompass more than three objectives. One of the known rationales is the loss of selection pressure…

Neural and Evolutionary Computing · Computer Science 2018-02-27 Yanan Sun , Gary G. Yen , Zhang Yi

Traditional stereo matching algorithms like Semi-Global Block Matching (SGBM) with Weighted Least Squares (WLS) filtering offer speed advantages over neural networks for UAV applications, generating disparity maps in approximately 0.5…

Computer Vision and Pattern Recognition · Computer Science 2025-12-08 Yida Lin , Bing Xue , Mengjie Zhang , Sam Schofield , Richard Green

By building upon the recent theory that established the connection between implicit generative modeling (IGM) and optimal transport, in this study, we propose a novel parameter-free algorithm for learning the underlying distributions of…

Machine Learning · Statistics 2019-06-12 Antoine Liutkus , Umut Şimşekli , Szymon Majewski , Alain Durmus , Fabian-Robert Stöter

An increasing number of machine learning problems, such as robust or adversarial variants of existing algorithms, require minimizing a loss function that is itself defined as a maximum. Carrying a loop of stochastic gradient ascent (SGA)…

Machine Learning · Computer Science 2021-11-29 Othmane Sebbouh , Marco Cuturi , Gabriel Peyré

In literature, Clustered Shortest-Path Tree Problem (CluSPT) is an NP-hard problem. Previous studies often search for an optimal solution in relatively large space. To enhance the performance of the search process, two approaches are…

Neural and Evolutionary Computing · Computer Science 2020-10-20 Phan Thi Hong Hanh , Pham Dinh Thanh , Huynh Thi Thanh Binh

Heat and power have become the most indispensable resources. However, the traditional ways of generating power and heat are inefficient and cause high pollution; a CHP (Combined Heat and Power) unit can solve these problems well. In recent…

Signal Processing · Electrical Eng. & Systems 2020-02-27 Jiaze Sun , Jiahui Deng , Yang Li

Distributed quantum computing has been well-known for many years as a system composed of a number of small-capacity quantum circuits. Limitations in the capacity of monolithic quantum computing systems can be overcome by using distributed…

Evolutionary Algorithms (EA) have been successfully used for the optimization of neural networks for policy search, but they still remain sample inefficient and underperforming in some cases compared to gradient-based reinforcement learning…

Neural and Evolutionary Computing · Computer Science 2024-05-08 Paul Templier , Emmanuel Rachelson , Antoine Cully , Dennis G. Wilson

Deep neural network learning can be formulated as a non-convex optimization problem. Existing optimization algorithms, e.g., Adam, can learn the models fast, but may get stuck in local optima easily. In this paper, we introduce a novel…

Machine Learning · Computer Science 2019-03-12 Jiawei Zhang , Fisher B. Gouza

Genetic Algorithm (GA) is a popular meta-heuristic evolutionary algorithm that uses stochastic operators to find optimal solution and has proved its effectiveness in solving many complex optimization problems (such as classification,…

Neural and Evolutionary Computing · Computer Science 2023-05-02 Fahad Maqbool , Muhammad Saad Razzaq , Hajira Jabeen

A formalism for describing the dynamics of Genetic Algorithms (GAs) using methods from statistical mechanics is applied to the problem of generalization in a perceptron with binary weights. The dynamics are solved for the case where a new…

Condensed Matter · Physics 2009-10-28 Magnus Rattray , Jonathan Shapiro

In the context of many applications of turbulent multi-phase flows, knowledge of the dispersed phase size distribution and its evolution is critical to predicting important macroscopic features. We use a population dynamics model for…

Fluid Dynamics · Physics 2021-04-19 Aditya Aiyer , Di Yang , Marcelo Chamecki , Charles Meneveau

A new model for evolving Evolutionary Algorithms (EAs) is proposed in this paper. The model is based on the Multi Expression Programming (MEP) technique. Each MEP chromosome encodes an evolutionary pattern that is repeatedly used for…

Neural and Evolutionary Computing · Computer Science 2021-10-13 Mihai Oltean

Designing high-performance optical lenses entails exploring a high-dimensional, tightly constrained space of surface curvatures, glass choices, element thicknesses, and spacings. In practice, standard optimizers (e.g., gradient-based local…

Neural and Evolutionary Computing · Computer Science 2026-01-30 Kirill Antonov , Teus Tukker , Tiago Botari , Thomas H. W. Bäck , Anna V. Kononova , Niki van Stein

Evolutionary algorithms (EAs) are a kind of nature-inspired general-purpose optimization algorithm, and have shown empirically good performance in solving various real-word optimization problems. During the past two decades, promising…

Neural and Evolutionary Computing · Computer Science 2022-11-29 Chao Qian , Yang Yu , Ke Tang , Xin Yao , Zhi-Hua Zhou

In this paper, the author proposes optimal tree as a "gauge" for the generation of the initial population at random in the Genetic Algorithms (GA) to benchmark against the good and the bad parent tours. Thus, without having the so-called…

Other Computer Science · Computer Science 2012-04-12 Sing Liew