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This paper proposes a new active learning method for semantic segmentation. The core of our method lies in a new annotation query design. It samples informative local image regions (e.g., superpixels), and for each of such regions, asks an…

Computer Vision and Pattern Recognition · Computer Science 2023-11-07 Sehyun Hwang , Sohyun Lee , Hoyoung Kim , Minhyeon Oh , Jungseul Ok , Suha Kwak

The performance of learning-based algorithms improves with the amount of labelled data used for training. Yet, manually annotating data is particularly difficult for medical image segmentation tasks because of the limited expert…

Computer Vision and Pattern Recognition · Computer Science 2023-09-12 Mélanie Gaillochet , Christian Desrosiers , Hervé Lombaert

Imbalanced datasets pose a considerable challenge in training deep learning (DL) models for medical diagnostics, particularly for segmentation tasks. Imbalance may be associated with annotation quality limited annotated datasets, rare…

Image and Video Processing · Electrical Eng. & Systems 2025-04-08 Bashir Alam , Masa Cirkovic , Mete Harun Akcay , Md Kaf Shahrier , Sebastien Lafond , Hergys Rexha , Kurt Benke , Sepinoud Azimi , Janan Arslan

Semantic segmentation of medical images is pivotal in applications like disease diagnosis and treatment planning. While deep learning has excelled in automating this task, a major hurdle is the need for numerous annotated segmentation…

Image and Video Processing · Electrical Eng. & Systems 2024-09-02 Li Zhang , Basu Jindal , Ahmed Alaa , Robert Weinreb , David Wilson , Eran Segal , James Zou , Pengtao Xie

Since annotating medical images for segmentation tasks commonly incurs expensive costs, it is highly desirable to design an annotation-efficient method to alleviate the annotation burden. Recently, contrastive learning has exhibited a great…

Computer Vision and Pattern Recognition · Computer Science 2023-09-19 Yixuan Wu , Jintai Chen , Jiahuan Yan , Yiheng Zhu , Danny Z. Chen , Jian Wu

Machine learning models for medical images can help physicians diagnose and manage diseases. However, due to the fact that medical image annotation requires a great deal of manpower and expertise, as well as the fact that clinical…

Image and Video Processing · Electrical Eng. & Systems 2023-11-21 Can Li , Sheng Shao , Junyi Qu , Shuchao Pang , Mehmet A. Orgun

Segmentation is one of the most important tasks in the medical imaging pipeline as it influences a number of image-based decisions. To be effective, fully supervised segmentation approaches require large amounts of manually annotated…

Computer Vision and Pattern Recognition · Computer Science 2026-03-19 Tyler Ward , Aaron Moseley , Abdullah-Al-Zubaer Imran

Reducing the quantity of annotations required for supervised training is vital when labels are scarce and costly. This reduction is particularly important for semantic segmentation tasks involving 3D datasets, which are often significantly…

Computer Vision and Pattern Recognition · Computer Science 2023-09-06 Andrej Janda , Brandon Wagstaff , Edwin G. Ng , Jonathan Kelly

Imaging mass cytometry (IMC) is a relatively new technique for imaging biological tissue at subcellular resolution. In recent years, learning-based segmentation methods have enabled precise quantification of cell type and morphology, but…

Image and Video Processing · Electrical Eng. & Systems 2025-06-06 Kimberley M. Bird , Xujiong Ye , Alan M. Race , James M. Brown

Since the preparation of labeled data for training semantic segmentation networks of point clouds is a time-consuming process, weakly supervised approaches have been introduced to learn from only a small fraction of data. These methods are…

Computer Vision and Pattern Recognition · Computer Science 2022-09-16 Gengxin Liu , Oliver van Kaick , Hui Huang , Ruizhen Hu

Obtaining annotations for 3D medical images is expensive and time-consuming, despite its importance for automating segmentation tasks. Although multi-task learning is considered an effective method for training segmentation models using…

Computer Vision and Pattern Recognition · Computer Science 2020-09-24 Junichiro Iwasawa , Yuichiro Hirano , Yohei Sugawara

Medical image annotations are prohibitively time-consuming and expensive to obtain. To alleviate annotation scarcity, many approaches have been developed to efficiently utilize extra information, e.g.,semi-supervised learning further…

Computer Vision and Pattern Recognition · Computer Science 2020-07-14 Kang Li , Shujun Wang , Lequan Yu , Pheng-Ann Heng

Accurate segmentation of critical anatomical structures is at the core of medical image analysis. The main bottleneck lies in gathering the requisite expert-labeled image annotations in a scalable manner. Methods that permit to produce…

Computer Vision and Pattern Recognition · Computer Science 2020-07-09 Yuhang Lu , Weijian Li , Kang Zheng , Yirui Wang , Adam P. Harrison , Chihung Lin , Song Wang , Jing Xiao , Le Lu , Chang-Fu Kuo , Shun Miao

Purpose: Automating tasks such as lung tumor localization and segmentation in radiological images can free valuable time for radiologists and other clinical personnel. Convolutional neural networks may be suited for such tasks, but require…

Image and Video Processing · Electrical Eng. & Systems 2021-12-23 Vemund Fredriksen , Svein Ole M. Svele , André Pedersen , Thomas Langø , Gabriel Kiss , Frank Lindseth

Histopathological image segmentation is a challenging and important topic in medical imaging with tremendous potential impact in clinical practice. State of the art methods rely on hand-crafted annotations which hinder clinical translation…

High-quality labeled data is essential to successfully train supervised machine learning models. Although a large amount of unlabeled data is present in the medical domain, labeling poses a major challenge: medical professionals who can…

Machine Learning · Computer Science 2020-04-21 Abhijeet Parida , Aadhithya Sankar , Rami Eisawy , Tom Finck , Benedikt Wiestler , Franz Pfister , Julia Moosbauer

Medical Image Segmentation is a useful application for medical image analysis including detecting diseases and abnormalities in imaging modalities such as MRI, CT etc. Deep learning has proven to be promising for this task but usually has a…

Image and Video Processing · Electrical Eng. & Systems 2023-02-08 Soham Bhosale , Arjun Krishna , Ge Wang , Klaus Mueller

Statistical Shape Models (SSMs) excel at identifying population level anatomical variations, which is at the core of various clinical and biomedical applications, including morphology-based diagnostics and surgical planning. However, the…

Computer Vision and Pattern Recognition · Computer Science 2025-03-28 Asma Khan , Tushar Kataria , Janmesh Ukey , Shireen Y. Elhabian

Segmentation of anatomical structures is a fundamental image analysis task for many applications in the medical field. Deep learning methods have been shown to perform well, but for this purpose large numbers of manual annotations are…

Computer Vision and Pattern Recognition · Computer Science 2019-12-24 Firat Ozdemir , Zixuan Peng , Philipp Fuernstahl , Christine Tanner , Orcun Goksel

Accurate automatic medical image segmentation relies on high-quality, dense annotations, which are costly and time-consuming. Weakly supervised learning provides a more efficient alternative by leveraging sparse and coarse annotations…

Computer Vision and Pattern Recognition · Computer Science 2025-06-24 Dongdong Meng , Sheng Li , Hao Wu , Suqing Tian , Wenjun Ma , Guoping Wang , Xueqing Yan