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Identification of experimentally acquired mass spectra of unknown compounds presents a~particular challenge because reliable spectral databases do not cover the potential chemical space with sufficient density. Therefore machine learning…

Data Analysis, Statistics and Probability · Physics 2023-04-05 Adam Hájek , Michal Starý , Filip Jozefov , Helge Hecht , Elliott Price , Aleš Křenek

We present a conceptually simple method for treating electron-phonon scattering and phonon limited mobilities. By combining Green's function based transport calculations and molecular dynamics (MD), we obtain a temperature dependent…

Mesoscale and Nanoscale Physics · Physics 2017-06-28 Troels Markussen , Mattias Palsgaard , Daniele Stradi , Tue Gunst , Mads Brandbyge , Kurt Stokbro

A deterministic method is proposed for solving the Boltzmann equation. The method employs a Galerkin discretization of the velocity space and adopts, as trial and test functions, the collocation basis functions based on weights and roots of…

Computational Physics · Physics 2013-11-19 Gian Pietro Ghiroldi , Livio Gibelli

We present a numerical method for simulating rarefied gases that interact with moving boundaries and rigid bodies. The gas is described by the BGK equation in Lagrangian form and solved using an Arbitrary Lagrangian-Eulerian method, in…

Numerical Analysis · Mathematics 2026-04-28 Klaas Willems , Axel Klar , Giovanni Russo , Giovanni Samaey , Sudarshan Tiwari

Gaussian Process (GP) models are a powerful tool in probabilistic machine learning with a solid theoretical foundation. Thanks to current advances, modeling complex data with GPs is becoming increasingly feasible, which makes them an…

Machine Learning · Computer Science 2025-03-04 Sarem Seitz

Gaussian graphical model selection is usually studied under independent sampling, but in many applications observations arise from dependent dynamics. We study structure learning when the data consist of a single trajectory of Gaussian…

Machine Learning · Computer Science 2026-05-13 Vignesh Tirukkonda , Anirudh Rayas , Gautam Dasarathy

We present a general phase-space kinetic model for charged particle transport through combined localised and delocalised states, capable of describing scattering collisions, trapping, detrapping and losses. The model is described by a…

Statistical Mechanics · Physics 2016-09-14 Peter W. Stokes , Bronson Philippa , Daniel Cocks , Ronald D. White

We consider in this work the numerical computation of transport coefficients for Brownian dynamics. We investigate the discretization error arising when simulating the dynamics with the Smart MC algorithm (also known as Metropolis-adjusted…

Numerical Analysis · Mathematics 2015-01-21 Max Fathi , A. -A. Homman , G. Stoltz

The homogeneous Boltzmann equation for inelastic Maxwell mixtures is considered to study the dynamics of tracer particles or impurities (solvent) immersed in a uniform granular gas (solute). The analysis is based on exact results derived…

Statistical Mechanics · Physics 2013-01-21 V. Garzó , E. Trizac

Motivated by subdiffusive motion of bio-molecules observed in living cells we study the stochastic properties of a non-Brownian particle whose motion is governed by either fractional Brownian motion or the fractional Langevin equation and…

Statistical Mechanics · Physics 2016-09-08 Jae-Hyung Jeon , Ralf Metzler

The purpose of the research is to find the numerical solutions to the system of time dependent nonlinear parabolic partial differential equations (PDEs) utilizing the Modified Galerkin Weighted Residual Method (MGWRM) with the help of…

Numerical Analysis · Mathematics 2023-07-11 Hazrat Ali , Nilormy Gupta Trisha , Md. Shafiqul Islam

In this work, we propose a two-stage algorithm based on Bayesian modeling and computation aiming at quantifying analyte concentrations or quantities in complex mixtures with Raman spectroscopy. A hierarchical Bayesian model is built for…

Applications · Statistics 2018-05-22 Ningren Han , Rajeev J. Ram

We adapt the Gradient Discretisation Method (GDM), originally designed for elliptic and parabolic partial differential equations, to the case of a linear scalar hyperbolic equations. This enables the simultaneous design and convergence…

Numerical Analysis · Mathematics 2019-10-28 Jérôme Droniou , Robert Eymard , T. Gallouët , R. Herbin

Medical image segmentation is a critical step in computer-aided diagnosis, and convolutional neural networks are popular segmentation networks nowadays. However, the inherent local operation characteristics make it difficult to focus on the…

Computer Vision and Pattern Recognition · Computer Science 2023-05-18 Fenghe Tang , Jianrui Ding , Lingtao Wang , Min Xian , Chunping Ning

We present a new numerical algorithm based on a relative energy scaling for collisional kinetic equations allowing to study numerically their long time behavior, without the usual problems related to the change of scales in velocity…

Analysis of PDEs · Mathematics 2015-06-04 Francis Filbet , Thomas Rey

Dynamical Systems (DS) are fundamental to the modeling and understanding time evolving phenomena, and have application in physics, biology and control. As determining an analytical description of the dynamics is often difficult, data-driven…

Machine Learning · Computer Science 2022-11-23 Bernardo Fichera , Aude Billard

To extend the discrete velocity method (DVM) and unified methods to more realistic boundary conditions, a Cercignani-Lampis (CL) boundary with different momentum and thermal energy accommodations is proposed and integrated into the DVM…

Fluid Dynamics · Physics 2025-04-07 Jianfeng Chen , Sha Liu , Rui Zhang , Hao Jin , Congshan Zhuo , Ming Fang , Yanguang Yang , Chengwen Zhong

Chemical reaction networks underpin biological and physical phenomena across scales, from microbial interactions to planetary atmosphere dynamics. Bacterial communities exhibit complex competitive interactions for resources, human organs…

Molecular Networks · Quantitative Biology 2026-01-08 Jorge Reyes , Jörn Dunkel

Fine-grained visual categorization is a classification task for distinguishing categories with high intra-class and small inter-class variance. While global approaches aim at using the whole image for performing the classification,…

Computer Vision and Pattern Recognition · Computer Science 2020-07-07 Dimitri Korsch , Paul Bodesheim , Joachim Denzler

By reducing resolution, coarse-grained models greatly accelerate molecular simulations, unlocking access to long-timescale phenomena, though at the expense of microscopic information. Recovering this fine-grained detail is essential for…

Chemical Physics · Physics 2026-03-27 Sander Hummerich , Tristan Bereau , Ullrich Köthe