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This work introduces a Bayesian methodology for fitting large discrete graphical models with spike-and-slab priors to encode sparsity. We consider a quasi-likelihood approach that enables node-wise parallel computation resulting in reduced…

Methodology · Statistics 2019-10-21 Anwesha Bhattacharyya , Yves Atchade

In this paper, we introduce the cyclic polygon plot, a representation based on a novel projection concept for multi-dimensional values. Cyclic polygon plots combine the typically competing requirements of quantitativeness, image-space…

Graphics · Computer Science 2024-03-11 Maksim Schreck , Peter Albers , Filip Sadlo

We study general coordinate-wise MCMC schemes (such as Metropolis-within-Gibbs samplers), which are commonly used to fit Bayesian non-conjugate hierarchical models. We relate their convergence properties to the ones of the corresponding…

Computation · Statistics 2026-01-12 Filippo Ascolani , Gareth O. Roberts , Giacomo Zanella

Insightful visualization of multidimensional scalar fields, in particular parameter spaces, is key to many fields in computational science and engineering. We propose a principal component-based approach to visualize such fields that…

Graphics · Computer Science 2018-09-12 Rafael Ballester-Ripoll , Renato Pajarola

Biological processes involve a variety of spatial and temporal scales. A holistic understanding of many biological processes therefore requires multi-scale models which capture the relevant properties on all these scales. In this manuscript…

Molecular Networks · Quantitative Biology 2015-06-23 Jan Hasenauer , Nick Jagiella , Sabrina Hross , Fabian J. Theis

A new n-dimensional family of Poisson structures is globally characterized and analyzed, including the construction of its main features: the symplectic structure and the reduction to the Darboux canonical form. Examples are given and…

Mathematical Physics · Physics 2019-10-29 Benito Hernández-Bermejo

This work presents an initial analysis of using bijective mappings to extend the Theory of Functional Connections to non-rectangular two-dimensional domains. Specifically, this manuscript proposes three different mappings techniques: a)…

Numerical Analysis · Mathematics 2020-08-18 Daniele Mortari , David Anas

We discuss local linear smooth backfitting for additive non-parametric models. This procedure is well known for achieving optimal convergence rates under appropriate smoothness conditions. In particular, it allows for the estimation of each…

Statistics Theory · Mathematics 2022-01-27 Munir Hiabu , Enno Mammen , Joseph T. Meyer

In our previous papers [11,13] we showed that the Hamilton-Jacobi problem can be regarded as a way to describe a given dynamics on a phase space manifold in terms of a family of dynamics on a lower-dimensional manifold. We also showed how…

We propose a novel method of finding principal components in multivariate data sets that lie on an embedded nonlinear Riemannian manifold within a higher-dimensional space. Our aim is to extend the geometric interpretation of PCA, while…

Methodology · Statistics 2024-06-05 Zhigang Yao , Benjamin Eltzner , Tung Pham

Two-scale models pose a promising approach in simulating reactive flow and transport in evolving porous media. Classically, homogenized flow and transport equations are solved on the macroscopic scale, while effective parameters are…

Analysis of PDEs · Mathematics 2022-02-01 Stephan Gärttner , Peter Knabner , Nadja Ray

The dominant approach for learning local patch descriptors relies on small image regions whose scale must be properly estimated a priori by a keypoint detector. In other words, if two patches are not in correspondence, their descriptors…

Computer Vision and Pattern Recognition · Computer Science 2019-08-16 Patrick Ebel , Anastasiia Mishchuk , Kwang Moo Yi , Pascal Fua , Eduard Trulls

Factor models are widely used across diverse areas of application for purposes that include dimensionality reduction, covariance estimation, and feature engineering. Traditional factor models can be seen as an instance of linear embedding…

Methodology · Statistics 2020-08-13 Xingchen Yu , Abel Rodriguez

One notion of non-locality in quantum theory is the fact that information may be encoded in a composite system in such a way that it is not accessible through local measurements, even with the assistance of classical communication. Thus,…

Quantum Physics · Physics 2022-10-05 Sarah Croke

Recent developments in spatial omics technologies have enabled the generation of high dimensional molecular data, such as transcriptomes, proteomes, and epigenomes, within their spatial tissue context, either through coprofiling on the same…

Quantitative Methods · Quantitative Biology 2026-01-21 Esra Busra Isik , Yusuf Hakan Usta , Haozhe Liu , Maryam Riazi , William Roach , Hongpeng Zhou , Magnus Rattray , Sokratia Georgaka

The hippocampus supports spatial navigation by encoding cognitive maps through collective place cell activity. We model the place cell population as non-negative spatial embeddings derived from the spectral decomposition of multi-step…

Neurons and Cognition · Quantitative Biology 2025-10-28 Minglu Zhao , Dehong Xu , Deqian Kong , Wen-Hao Zhang , Ying Nian Wu

This work addresses the problem of identifiability, that is, the question of whether parameters can be recovered from data, for linear compartmental models. Using standard differential algebra techniques, the question of whether a given…

Algebraic Geometry · Mathematics 2021-06-30 Elizabeth Gross , Nicolette Meshkat , Anne Shiu

One of the founding paradigms of machine learning is that a small number of variables is often sufficient to describe high-dimensional data. The minimum number of variables required is called the intrinsic dimension (ID) of the data.…

Machine Learning · Statistics 2020-07-14 Michele Allegra , Elena Facco , Francesco Denti , Alessandro Laio , Antonietta Mira

A local projection model is defined by a set of linear regressions that account for the associations between exogenous variables and an endogenous variable observed at different time points. While it is standard practice to separately…

Methodology · Statistics 2020-07-14 Masahiro Tanaka

As the amount and complexity of genetic information increases it is necessary that we explore some efficient ways of handling these data. This study takes the "divide and conquer" approach for analyzing high dimensional genomic data. Our…

Applications · Statistics 2013-08-15 Deniz Akdemir